| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Nmar_0422 |
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| Symbol | |
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| ID | 5773164 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nitrosopumilus maritimus SCM1 |
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| Kingdom | Archaea |
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| Replicon accession | NC_010085 |
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| Strand | + |
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| Start bp | 378343 |
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| End bp | 379758 |
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| Gene Length | 1416 bp |
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| Protein Length | 471 aa |
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| Translation table | 11 |
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| GC content | 39% |
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| IMG OID | 641316052 |
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| Product | 3-isopropylmalate dehydratase large subunit |
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| Protein accession | YP_001581756 |
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| Protein GI | 161527930 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0065] 3-isopropylmalate dehydratase large subunit |
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| TIGRFAM ID | [TIGR00170] 3-isopropylmalate dehydratase, large subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 0.0695199 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGGAAAAA CACTTTTTGA AAAAATTTGG GATGCACATG TTGTAGTTGG AAAAGAAAAC
GGCCCATCTT TGATTTACAT CGATAGACAT CTAGTTCACG AAGTAACTTC TCCTCAGGCC
TTTGATGGTC TTAGAATGAA TAACAGAAAG GTTAGGAGAC CTGATCTTAC CATTGCAACA
ATGGATCATA ATGTTCCTAC AACTGATAGG GGGCTTCCAA TTTTAGATCA AACATCATCT
GTACAAATTC AAACACTAGA AAAAAACTGC CAAGATTTCG GAATTAAACT ATTTGATATT
AACAGTCCTA ATCAAGGAAT AGTTCATGTC ATTGGGCCTC AACTTGGAAT CACTTTACCT
GGTTCCACTA TTGTTTGTGG TGACAGTCAC ACTTCTACTC ATGGTGCATT TGGTGCTCTT
GCATTTGGAA TTGGAACAAG CGAAGTAGAA CATGTTTTGG CATCCCAGAC TTTGTGGCTA
GAAAAACCAA AACCCTTTGA AATTAGAGTA GAAGGAAAGC GAAAGAACCC TCATGCTGTT
ACTGCAAAAG ATATCGTACT ATCCATTATC AAAAATATTG GAACTGGCGG TGGGACTGGA
ACTGTAATAG AGTACCGTGG TGAGGGAATA GAGGACCTTT CCATGGAGCA GAGAATGACC
ATATGTAACA TGTCAATTGA GGCTGGTGCT CGTGCTGGAT TGATTGCCCC TGATGAGAAG
ACTTATGATT ATCTTAGAGA TAGGCAATAC ACTCCAAAAA ACTATGAATC TCTTGTAGAA
TACTGGCGAG AAAATCTAAA ATCAGATGAT GATGCAAAAT TTGAAAAACA ATTCACATTA
CACATTGATG ATATTGCACC TCAAGTAAGT TGGGGAACAA ATCCTGGAAT GACTTGTGAT
GTAACTGAAA CAGTTCCAAC ACCTGACGAG TTTTCAAAAG GCGATTCCAA TCAAAAGAAG
GGTGCAGAAA AGGCACTTGA TTACATGGAC CTTAAATCTG GAACACCAAT TGAAGAAATT
AAAATCGACA GAGTGTTCAT TGGCTCTTGT ACTAATGCAA GACTTGAAGA TTTGATTGAA
GCCTCCAAAG TAGTCAAAGG ACAAAAAGTT TCTCCAGATG TTCGTGCAAT GGTGGTTCCT
GGCTCTCAAA TGGTAAAGAA ACAAGCTGAA GAGATGGGTC TTGATAAAAT TTTCACTAAT
GCTAACTTTG AATGGAGGGA AGCTGGATGT AGTATGTGTC TTGGAATGAA TCCTGATATT
TTATCTCCAG GAGAAAGATG TGCAAGTACT TCTAATCGAA ACTTTGAAGG AAGACAGGGC
ACTGGTGGAC GAACTCATTT GGTTAGTCCT GTAATGGCAG CTGCTGCTGC AATCAATGGA
CATTTTGTTG ATGTAAGGAA GATGGATTTG AGTTAA
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| Protein sequence | MGKTLFEKIW DAHVVVGKEN GPSLIYIDRH LVHEVTSPQA FDGLRMNNRK VRRPDLTIAT
MDHNVPTTDR GLPILDQTSS VQIQTLEKNC QDFGIKLFDI NSPNQGIVHV IGPQLGITLP
GSTIVCGDSH TSTHGAFGAL AFGIGTSEVE HVLASQTLWL EKPKPFEIRV EGKRKNPHAV
TAKDIVLSII KNIGTGGGTG TVIEYRGEGI EDLSMEQRMT ICNMSIEAGA RAGLIAPDEK
TYDYLRDRQY TPKNYESLVE YWRENLKSDD DAKFEKQFTL HIDDIAPQVS WGTNPGMTCD
VTETVPTPDE FSKGDSNQKK GAEKALDYMD LKSGTPIEEI KIDRVFIGSC TNARLEDLIE
ASKVVKGQKV SPDVRAMVVP GSQMVKKQAE EMGLDKIFTN ANFEWREAGC SMCLGMNPDI
LSPGERCAST SNRNFEGRQG TGGRTHLVSP VMAAAAAING HFVDVRKMDL S
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