Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Nmar_0188 |
Symbol | |
ID | 5774154 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Nitrosopumilus maritimus SCM1 |
Kingdom | Archaea |
Replicon accession | NC_010085 |
Strand | + |
Start bp | 170346 |
End bp | 170942 |
Gene Length | 597 bp |
Protein Length | 198 aa |
Translation table | 11 |
GC content | 36% |
IMG OID | 641315805 |
Product | hypothetical protein |
Protein accession | YP_001581522 |
Protein GI | 161527696 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | 30 |
Fosmid unclonability p-value | 0.478226 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | TTGACCCTCG TAACAAAATC AATCGATATT AAGACACCTG TTGAGAATGT CTTTACCTAC TTTGCAAGAC CAGAACATGT TTCTGATCAA ATCAAAACTG ATGCAGTAGG TATGACAGTA GTTCCTATGG ATATTAAGGA AGGAATGGGT GTAGGTACAA CCTTTAGAAT TATCGGTGAC TTTAGCGGTA AACGTTTAGA GTGGGATTGT GAGACAACCG AATTTGTTAG AAATGAGAAA ATTACTGCAA AACAAATTGA AGGTCCATTC AAGAAATGGC AAATCACTAA TGAGTTCAAA TCATTAGGAA ATAACCTCAC AAGAGTTACA ATGTCAGTAG ATTATGAAAT GCCATTTGGT CCACTAGGAG CAATTATGGA TAAAGCAAAG TTTGCAAAAT CTGCTGAGAG AGGAATGGAA ACTGCCCTTT ACAACGTTAG AGGTTTGTTA GAAGGAAATG GTTCAATTCC AGTATACATC ACACTCGAAG CATACCAAAA ACTTCTTGCC GAAAAGAAAA AGATGAATGA TGTTCCAGTT TCAACTGCAC TAACTGCAAT CATTGAAAAA TACAATGAAA TTGAAGCTAA AGCATAA
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Protein sequence | MTLVTKSIDI KTPVENVFTY FARPEHVSDQ IKTDAVGMTV VPMDIKEGMG VGTTFRIIGD FSGKRLEWDC ETTEFVRNEK ITAKQIEGPF KKWQITNEFK SLGNNLTRVT MSVDYEMPFG PLGAIMDKAK FAKSAERGME TALYNVRGLL EGNGSIPVYI TLEAYQKLLA EKKKMNDVPV STALTAIIEK YNEIEAKA
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