| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Nmar_0184 |
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| Symbol | |
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| ID | 5773760 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nitrosopumilus maritimus SCM1 |
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| Kingdom | Archaea |
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| Replicon accession | NC_010085 |
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| Strand | + |
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| Start bp | 166798 |
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| End bp | 168324 |
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| Gene Length | 1527 bp |
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| Protein Length | 508 aa |
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| Translation table | 11 |
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| GC content | 40% |
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| IMG OID | 641315801 |
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| Product | cytochrome c oxidase subunit I |
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| Protein accession | YP_001581518 |
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| Protein GI | 161527692 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0843] Heme/copper-type cytochrome/quinol oxidases, subunit 1 |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 26 |
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| Fosmid unclonability p-value | 0.194968 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGTTCTGG AATTACAAAA ACCACGTCCA ATTTGGCAAA TAATGTTCTC AACACATCAC
ACTGATGTTG GTTTACTTTA TCTTATCATG TCACTAGGAT TCTTGTTCTT GGGTGGTGCG
TTAGCACTTG CAATTAGAGC TGAATTATTC TTGCCAGGTG CACAAATCAT TGGTGATGCA
ATGACCTTTA ACAGAATCTT TACAGTTCAC GGAACTACTC TTATCTTCTT GTTTATCATA
CCATTTGCAT CTGCTGTTGG TAACTACTTT GTTCCAATTA TGGTCAGATA CAAAGACATG
GCTTATCCAA AACTCAATGC AATTGCATTT TGGATGATTC CTCCATCAGG AGCACTCATC
TGGTTAGGCT TTGCAGACTT TACTTGGTAT GCAACTCCTC CATATTCTAT TATCAGTGCT
CCAGGTCCAG CAGCAGACAT GTGGATCTTT GGACTAAAGA TTTTAGGTGT ATCTTCAGTT
CTTGGTGCAA TCAACTTTGT CGTTACAATT CTCAAATGTA AACACCCAGA CATGTCAATT
GGTCAAGTAC CGCTATTGGC TTGGTCCTTC TTGTCATCAT CATTAATCAT CCTTGTTGCA
ATTCCAACAT TTGCAGCAGC ACTGTTGATG TTGTTAACTG ACAGACTCGG TGTAACTGGA
TTCTTTAATC CCGCAATGGG AGGAGATCCA ATTGCATATG CACACTTGTT CTGGTTTACA
TTCCATCCAG AAGTATACGT TCTTGTCATT CCAGCTATTG GTATGATGTA TGAAATTATT
CCAAGATTCT CAAGAAAACC AATTTACAGT TTCAACTCTG GTATCTTTGC CTTTGTACTA
TTATCTATTG TTGGTTTCTC ATCATGGGCT CACCACATGT ATGCAACTGG AATGTCCTTT
ACAGAAAAGA CTGTATTCAT GGTAGGAACT CTTGCAGCAG TTCCAGCATC TGCAATGCAC
GTCTATAACT TCATTGCAAC AATGTGGAAT GGTAGAATCA AGTTCTCAAC TCCAATGATG
TGGGCTGTTG GCGGAATTGC ATTATTCTTC TCAGCAGGTG CAGGTGGTGT AGCAAATGCT
GCAATGCCAT TAGACTTTAC AACTCACGAT ACTTACTGGG TAGTTGGACA CTTCCATCTC
TTTGTGATGG GAACTATTGC ATTTGGTTCA ATCGGATTCC TTTACTACAT GTACCCATAT
GTTACAGGCA GAATGTACAA TGAAGCCATG GGTAAGATTC ACTTCTTCTT ATCATTTATA
GGAACAATTT TGGTATTCTT TACTCAACAC GTACTTGGAT TATATGGAAT GCCAAGAAGA
ATATTTGATT ATCCACCAAT CCCAGAATGG ATTGCAATGA ACCAAATTGC ATCAATTGGT
GCAATGGTAA TTGGTGTCAG TATGGTTGTC TTTTTGGTTA ACATGGTTTA CAGCGCTGGA
AAAGGAGAAC CTGCAAACCC AGAGGATCCA TTTGGTGTTG GAGGCAAATA CTATTATCCG
TTCGAGTCAA AGAACCCATC ACATTAG
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| Protein sequence | MVLELQKPRP IWQIMFSTHH TDVGLLYLIM SLGFLFLGGA LALAIRAELF LPGAQIIGDA
MTFNRIFTVH GTTLIFLFII PFASAVGNYF VPIMVRYKDM AYPKLNAIAF WMIPPSGALI
WLGFADFTWY ATPPYSIISA PGPAADMWIF GLKILGVSSV LGAINFVVTI LKCKHPDMSI
GQVPLLAWSF LSSSLIILVA IPTFAAALLM LLTDRLGVTG FFNPAMGGDP IAYAHLFWFT
FHPEVYVLVI PAIGMMYEII PRFSRKPIYS FNSGIFAFVL LSIVGFSSWA HHMYATGMSF
TEKTVFMVGT LAAVPASAMH VYNFIATMWN GRIKFSTPMM WAVGGIALFF SAGAGGVANA
AMPLDFTTHD TYWVVGHFHL FVMGTIAFGS IGFLYYMYPY VTGRMYNEAM GKIHFFLSFI
GTILVFFTQH VLGLYGMPRR IFDYPPIPEW IAMNQIASIG AMVIGVSMVV FLVNMVYSAG
KGEPANPEDP FGVGGKYYYP FESKNPSH
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