| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Nham_4561 |
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| Symbol | |
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| ID | 4025329 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nitrobacter hamburgensis X14 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007961 |
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| Strand | - |
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| Start bp | 17755 |
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| End bp | 18594 |
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| Gene Length | 840 bp |
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| Protein Length | 279 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 637965060 |
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| Product | conjugal transfer protein TrbG |
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| Protein accession | YP_571968 |
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| Protein GI | 92109682 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG3504] Type IV secretory pathway, VirB9 components |
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| TIGRFAM ID | [TIGR02775] P-type conjugative transfer protein TrbG |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.843427 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCACCCAT ACACCATCAG ACTCAAGACA GGGCTTTTCA TCGCTGCCGC TGCCTTCGGC
TTGCTGCTCG CCGATGTCAG CGCCCACGCG CAGGTGATGA ATGCCAAGGA GCGGAAAGGC
ACCCACATCT CGAGCCAGTG GCGCGGATCG ACCGGGCTCG TGACGCGCGG AGCCGACGGC
AAGGTGATTT TCCTCTTCGG AGAGGTGCAG CCTTCCGTGG TCTGCTCGCC ACTTGAGGTC
TGCGATATCG AACTCCAGGC GGGTGAGGTC GTGCGCGATG TGCTGGTCGG CGACACGGTG
CGCTGGAAGG TCGAGCCGGC GACGTCGGGC GCGGTCGGCG GCCAAGCTAT CCACCTGATC
GTCAAGCCGT CGGAGCCCGG GCTCGTCACC TCGATGGTGG TGACCACCTC GCGACGGACC
TACCACATCC AGCTCAAGTC GAACGCAATA CAATACATGG CGCGCGTCGG CTTCGAATAT
CCCGAGGACG TCAGCAGCAA GTTGGCCAAC ATTAACGCGC GTCTTGGCAC TGAGACGATC
CCCGGCGCCG GCGTCCCGGC CGAGCAGCTG AACTTCGCCT ATAGCGTCAG TGGCAGCGCC
TCCTGGCGGC CGACCCGCGT CTACAGCGAC GGCCTCAAGA CCTACATCCA GTTTCCGTCG
TCGCTCGCCG GACAGGATGC GCCGGTGCTT TTCGTCGAAT CGGGCGGCAA GGACCGGATC
GTCAACTATC GGCTGAAGGG TGACATGATG GTGGTCGATT ATCAGATCGA CACCGCCATT
CTGGTCTCCG GCGTGAGCTT TTGGCATCAG GAGAAGGTGA CGATCCGGAG GGGAGGCTGA
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| Protein sequence | MHPYTIRLKT GLFIAAAAFG LLLADVSAHA QVMNAKERKG THISSQWRGS TGLVTRGADG
KVIFLFGEVQ PSVVCSPLEV CDIELQAGEV VRDVLVGDTV RWKVEPATSG AVGGQAIHLI
VKPSEPGLVT SMVVTTSRRT YHIQLKSNAI QYMARVGFEY PEDVSSKLAN INARLGTETI
PGAGVPAEQL NFAYSVSGSA SWRPTRVYSD GLKTYIQFPS SLAGQDAPVL FVESGGKDRI
VNYRLKGDMM VVDYQIDTAI LVSGVSFWHQ EKVTIRRGG
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