Gene Nham_4426 details

Gene Information

• Locus tag: Nham_4426
• ID: 4025437
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Nitrobacter hamburgensis X14
• Kingdom: Bacteria
• Replicon accession: NC_007960
• Strand: +
• Start bp: 71968
• End bp: 72489
• Gene Length: 522 bp
• Protein Length: 173 aa
• Translation table: 11
• GC content: 60%
• IMG OID: 637964934
• Product: twin-arginine translocation pathway signal
• Protein accession: YP_571842
• Protein GI: 92109555
• COG category: [C] Energy production and conversion
• COG ID: [COG0723] Rieske Fe-S protein
• TIGRFAM ID: [TIGR01409] Tat (twin-arginine translocation) pathway signal sequence; [TIGR02694] arsenite oxidase, small subunit

Plasmid Coverage information

• Num covering plasmid clones: 18
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGTCTCACT GCGATCATTT GGTCGATGTT GGGCGCCGCA AATTTCTGAG CGGAGCCGGT 
CTCGCTGCCG CGGGTGCTGC AGCTGCGACC ATGGTACCAG TTCATGCTAA AGCCGCGCCT 
GGTTCTGCGC GCGTCGATTA CCCTTCAAAC CGTCTTGCCA ACATCGGCGA GTTGAAGCCC 
AACGAGGCAT TCAACGTGGC ATACCCCGAC GCGGATGCGC CCGGGGTCCT TCTCAAGCTG 
GGCAAGCGCG TTCCGGGCGG TGCCGGACCG GACGGCGACA TCGTGGGGTT TTCCACGATT 
TGCCCGCACA AGGGTTTTCC CCTCAATTAC AATGGCGTCG ACAAGACACT GAATTGCCCT 
GGCCATTACT CGCGCTTCGA TTGCGAATCC GGCGGCCAGC AAGTGTGGGG CCACGCCACG 
CAAAACCTCC CGCAGTACAT GCTTCGCATC GACGGCAAAG GCGACATCTA CGCCGAGGGT 
GTGGACGAGC TTTTGTACGG TCGTCTGTCC AACGTGTTGT GA 

 

Protein sequence

MSHCDHLVDV GRRKFLSGAG LAAAGAAAAT MVPVHAKAAP GSARVDYPSN RLANIGELKP 
NEAFNVAYPD ADAPGVLLKL GKRVPGGAGP DGDIVGFSTI CPHKGFPLNY NGVDKTLNCP 
GHYSRFDCES GGQQVWGHAT QNLPQYMLRI DGKGDIYAEG VDELLYGRLS NVL