Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Nham_4378 |
Symbol | |
ID | 4025238 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Nitrobacter hamburgensis X14 |
Kingdom | Bacteria |
Replicon accession | NC_007960 |
Strand | - |
Start bp | 30520 |
End bp | 31326 |
Gene Length | 807 bp |
Protein Length | 268 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 637964893 |
Product | purine phosphorylases family protein 1 |
Protein accession | YP_571801 |
Protein GI | 92109514 |
COG category | [F] Nucleotide transport and metabolism |
COG ID | [COG2820] Uridine phosphorylase |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.340466 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGGCGACGC CCCCGATCCT TGACAATAAG AATACCTCCT CACCTTCCGT TTTCCTGCCA TCGGCTTTGC TACGCGAATC GCGGCGACAA AAGAATCTTC CCGTTTCTCA GGTCCCGCCC GTCTGCCTGC TGGATCCCGA CGGAGACCTC GTCGGCAAAC TTCGGCAGAC GGGTCAGGCC AAGCGCTTCG CCTCTTGGCC ATGTTATCAC ACCGAGCTGG ATACGTTCAT GCTCGCCGGC CGTGAAATCG GGATCGTTGG ACGTGTGGTC GGCGCACCGT CTGCCGTTCT GGTGGCGGAA GAACTGTTCG CGAGCGGTTG TCGCCTGCTG ATCAGTCTGA CTTCGGCGGG ACAGATCGTC CCCTGCGGGC CGACACCCTA TTTCATCATC ATCGATCGCG CGCTGCGCGA TGAAGGGACG AGCTACCACT ATGCTCCGCC TTCCGAATTT GCCGAAGCCT GCCCTCTGCT GGTATCGAAG GCATTCGATG CCACGTCGCG AATCGAGCCT CGGGTCGTGG TCGGATCGAC TTGGACAACC GATGCACCGT TTCGCGAGAC GGCCGAAGCG ATCAGAGCGG CAAAGCTGAA AGGAATATTG GCCGTCGAAA TGGAGGCAGC CGCACTCTAC GCTTTCGCCC AGGCGGCGGG CGCAAAGCTT CTCTGCCTCG CCCATGTCAC AAATACAATG GGACAAGGCG GAGCCGATTT CGACAAAGGC GAGGCCGATG GCACGACGGA CGCCATCAAA ATGCTGGACC GCGTGGTCGC GGCTCTTTCG CACACAATCG ATACACCTGC GGTGTAA
|
Protein sequence | MATPPILDNK NTSSPSVFLP SALLRESRRQ KNLPVSQVPP VCLLDPDGDL VGKLRQTGQA KRFASWPCYH TELDTFMLAG REIGIVGRVV GAPSAVLVAE ELFASGCRLL ISLTSAGQIV PCGPTPYFII IDRALRDEGT SYHYAPPSEF AEACPLLVSK AFDATSRIEP RVVVGSTWTT DAPFRETAEA IRAAKLKGIL AVEMEAAALY AFAQAAGAKL LCLAHVTNTM GQGGADFDKG EADGTTDAIK MLDRVVAALS HTIDTPAV
|
| |