Gene Nham_4197 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNham_4197 
Symbol 
ID4025637 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrobacter hamburgensis X14 
KingdomBacteria 
Replicon accessionNC_007959 
Strand
Start bp156659 
End bp157414 
Gene Length756 bp 
Protein Length251 aa 
Translation table11 
GC content58% 
IMG OID637964744 
Producthypothetical protein 
Protein accessionYP_571652 
Protein GI92109364 
COG category[S] Function unknown 
COG ID[COG1801] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.052496 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGCAAGA AACCAAAGCC GGTTCTTCTC ATCGGAACCT CTGGCTGGAG TTACAAATCC 
TGGCGCGGTC CGTTTTTCCC GCCGCAACTT CCGGCCCGGT TTCACCTCGA CTACTACTCA
CATCACTTCC GCACGACGGA ACTTAACGGG GTTTTCTATC GGACACCGAC AACCGGGGCA
GTCCGTGCCT GGGTCGAACA GACTCCCCAA GAATTTGTCT TCGCCTGGAA GGTCTCAAAG
TTCATCACGC ACTGGAAACG GCTCGGCCCG AAATCCGGCA ACAGCCTCGC CCTGCTGGAA
CGTCGCCTCC GCCTTCTGAA GGCGAAGGCT GGTCCCGTGC TGTTTCAGCT TCCACCGCAA
TTTCAGAAGG ACACCACGCG GCTTGCGTCG TTTCTCAAGC GGCTCCGCAA ACCGCGCCCT
TACGTCTTTG AGTTTCGTCA TCCGAGCTGG TACACGCCGG AAACCTTCGA TCTTCTGCGC
GATCATAGCA GCGCCCTTTG CATCTCGGAC CATCACGACG CACCGGCACC ATGGAAGGTA
ACCGCACCCC ATGTCTACGT CCGCGCTCAT GGACCATCGG GAAACTATCG CGATCGTTAT
GCGCCGCAAA CACTGACGGC TTGGGCGCGG CGGCTATCAC GCCTGCGAAA CGAGGGACAC
AGTATCTACG TTTATTTCGA CAACGATCAG AAGAGCGCGG CTCCGCTCGA TGCCGCACGG
CTGATGCGGC TGATGCACTT GAAAGCTGAC GCATAG
 
Protein sequence
MSKKPKPVLL IGTSGWSYKS WRGPFFPPQL PARFHLDYYS HHFRTTELNG VFYRTPTTGA 
VRAWVEQTPQ EFVFAWKVSK FITHWKRLGP KSGNSLALLE RRLRLLKAKA GPVLFQLPPQ
FQKDTTRLAS FLKRLRKPRP YVFEFRHPSW YTPETFDLLR DHSSALCISD HHDAPAPWKV
TAPHVYVRAH GPSGNYRDRY APQTLTAWAR RLSRLRNEGH SIYVYFDNDQ KSAAPLDAAR
LMRLMHLKAD A