Gene Nham_3657 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNham_3657 
Symbol 
ID4029875 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrobacter hamburgensis X14 
KingdomBacteria 
Replicon accessionNC_007964 
Strand
Start bp4025978 
End bp4026406 
Gene Length429 bp 
Protein Length142 aa 
Translation table11 
GC content56% 
IMG OID637972069 
Productcupin 2, barrel 
Protein accessionYP_578845 
Protein GI92119116 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG4101] Predicted mannose-6-phosphate isomerase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.230089 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCAGGAT TGTCAGACGC GGTGAGAGTG ATTGAGCCCG GCAAGACCTA TATCGGCAAG 
CAGGGCTTTA CTTATGGAGC AGGCGTATCG AAGGAGACGG CCGGAGCAAA ACAGGTCTGT
TTGAATGTGC TGCCGATGCC TCCGGGTGCC AGGGCAAAGG TCCATTACCA CAAGGGTATC
GAGACGATCG CTTACCTTTT GGAAGGTGAA TGCGCGGTCT ATTACGGCGA CAAACTTGAG
CATCGCGTCG CAGTCAAGGC CGAGGATCAG GTCTATATGC CCGAGGATGT CCCGCACGCC
CCGTGCAATG AGAGCGGAGC GCCGTGCAAG TGGCTTGTCG TACATTCATC AGGTAGCGAT
CAGGACGGCA TCGTTCTGCT ACCAGAACTT GATGCAATGT TGGCGCAGAG GTCGAACGCG
ACAGCCTAA
 
Protein sequence
MSGLSDAVRV IEPGKTYIGK QGFTYGAGVS KETAGAKQVC LNVLPMPPGA RAKVHYHKGI 
ETIAYLLEGE CAVYYGDKLE HRVAVKAEDQ VYMPEDVPHA PCNESGAPCK WLVVHSSGSD
QDGIVLLPEL DAMLAQRSNA TA