Gene Nham_3330 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNham_3330 
Symbol 
ID4032243 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrobacter hamburgensis X14 
KingdomBacteria 
Replicon accessionNC_007964 
Strand
Start bp3675091 
End bp3676359 
Gene Length1269 bp 
Protein Length422 aa 
Translation table11 
GC content64% 
IMG OID637971740 
ProductPhage tail protein I 
Protein accessionYP_578522 
Protein GI92118793 
COG category[R] General function prediction only 
COG ID[COG4385] Bacteriophage P2-related tail formation protein 
TIGRFAM ID[TIGR01634] phage tail protein, P2 protein I family 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATTCCGT CGATCCTGCC ATCGCTGCGC CCGGATTATG AGCGCGAGAC GGAACGGCTG 
CTGCACCTGG TCGGTGCGAC CGACGTGGAT GCACTGCGGC GCATGCGCGA CCCGTTTCAG
TGTTCGCTTT CGCATCTACC CTTCCTCGCC TGGGGCCGCG GTGTCGATCT CTGGTACGAC
GACTGGCCGG AATGGAAGAT GCGCCGGATC ACCGCCGAGA TTTACGGCAT GAAGGGCCTC
AAAGGCACTC GGCCCGGCAT GGCGAAGTAT CTCAGCTTCG TCGACGCCGA GATCATCGAA
AGCTTCATCC CGCCGCGTGG CGTGATCGCA CGGCAGCAAG ACGCCTCGCT GTTGACCGCG
TGGCGCGAGC GCTTCGCCGA AATCCGGCTC TATCCGTTCG CAATTCGCGG CCGGCGGGCG
GGCTACATGG CGACAGGGCA GGGCAAGACG ACTCTGACGA TCGCTGGCCG CATGGCGGCG
CTGCCCGATC TGGCACACCT TTATTATGGT CGTCGCGCCG TGCTGGTCGA CGACGGCGTC
GAGACCACGC TGCGATCGTT GGATCAGATC CAGATCGACG GCGGCGATAT CGCTGTTCCG
ACGACGACCT TTGCCATCAC GGCGACCGGC CGCAGTTATG ATGCTTCGGT CGGGCGCGCG
GCAGTCGGCT TGATGGCGGC GACCGCGAAA GGCCGTGGCC GGCTGATCGT GATCAATGCC
GCAGGTAACA TTGGCGGCGC TGTAATTCCT GCCGGCTTCG AAGGCGTCGC GCCGCTCGAT
ATGGCGCCCC AGCGGATCTA TCAGCGGCAT CCGGCGCGCA TGCGGGAAGC GACGGTTGCC
GTCCGATATC GCGCCGCGGT TGGCAGGATG GTGGCTTATT CCTCGCAGGC GTCGCGTTTC
ATCTACGACA GTTGGCGATT GATGGACGAG GCGCGCGCGG GTAGCGACAC TCACCGCGCG
ATCGGCCCGA TCGTCGGCCG CATGATGCCA TTACTTCTGC CGTTCAATGC GCTGTTGCGC
ATCAATGCGC GGTTTCGCGC CACCGGGAGG CCGGCGGTCG CTGGAATGTG GGGCGTCGGC
CATATGACGG CGGGCCGGGC ATCTGATCGC ATCGATCGCG TCGGCGCTGC GATCTACCGT
TCGCGGTCGG TGCGCGACAC CGTGAAATTC ACGACCGCAA CTTACCGGCC CCGTACCGTG
GCCGATCTCT CTTTCGATCA TCCCGTCGAA TGGGGCGGCA TGGTTCCAAT TAACCGGAGC
ACACTATGA
 
Protein sequence
MIPSILPSLR PDYERETERL LHLVGATDVD ALRRMRDPFQ CSLSHLPFLA WGRGVDLWYD 
DWPEWKMRRI TAEIYGMKGL KGTRPGMAKY LSFVDAEIIE SFIPPRGVIA RQQDASLLTA
WRERFAEIRL YPFAIRGRRA GYMATGQGKT TLTIAGRMAA LPDLAHLYYG RRAVLVDDGV
ETTLRSLDQI QIDGGDIAVP TTTFAITATG RSYDASVGRA AVGLMAATAK GRGRLIVINA
AGNIGGAVIP AGFEGVAPLD MAPQRIYQRH PARMREATVA VRYRAAVGRM VAYSSQASRF
IYDSWRLMDE ARAGSDTHRA IGPIVGRMMP LLLPFNALLR INARFRATGR PAVAGMWGVG
HMTAGRASDR IDRVGAAIYR SRSVRDTVKF TTATYRPRTV ADLSFDHPVE WGGMVPINRS
TL