| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Nham_3279 |
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| Symbol | |
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| ID | 4029473 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nitrobacter hamburgensis X14 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007964 |
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| Strand | - |
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| Start bp | 3614149 |
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| End bp | 3615306 |
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| Gene Length | 1158 bp |
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| Protein Length | 385 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 637971691 |
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| Product | secretion protein HlyD |
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| Protein accession | YP_578473 |
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| Protein GI | 92118744 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG1566] Multidrug resistance efflux pump |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.119493 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACCGCCA TATCGTATGT TGTTGATTTA CCGGCAAAAA CCACGCTCCG GCTATCCCGG
CAGGCGATCA GGCGGGCAGC CCTGGCCGTC GCCGCCGCCG TGGGGGTCGC CGGTATCGTT
CATTTCGGGT ACGATTACTG GACCGTCGGG CGCTATCTCG AATCCACCGA CGACGCCTAT
GTCAAGGCAG ACTCGACGAT CATCGCGCCG AAAGTATCAG GCTACATCGA CAGGGTGCTG
GTCAGCGACA ATCAGCCGGT GAAGGCCGGG CAGGTTCTCG CCCGGATCGA CGATCGCGAT
TTCAGGACTG CGCTGGATCA GGCCCACGCC GATGTCGTAG CCGCGGAGGC GGCGGTCAGT
AACCTCGATG CCCAGATCGC GCTTCAGCAG CCGATGATCG CGCAGCAGAC GGCGGATGTC
GCCGCGGCGG AAGCGGGTTT GAAATTCGCG AGCGAAGAGC AGGCTCGCTA TGACGGCCTG
ATGAAAACCG GCTCGGGCAC CGTTCAGCGG GCCCAGCAGA CCGATGCAGC GCTTCACGAA
AAGACCGCTC AACTGCAACA TGGTCAATCC GCACTGCTGG CGGCGCATAA AAAAGTCGAT
GTGCTCACGA CCGAGCGCAG CAAGGCCGTG GCGCAGGTCG CTCGCGCCCA TGCGGTCGAG
CGGCAGATGG CGCTCAATCT GTCCTATACG ACCATCACCG CGCCGGTCGA CGGCACGGTC
GGCGCGCGCG CCTTGCGGGT CGGACAATAC GTGACGGCCG GCACGCCGTT GATGGCGGTG
GTGCCGCTCG ATGCGGTCTA TATCGTCGCC AATTTCAAGG AGACGCAACT GACGCATGTC
CGTCAGGGCC AGCCGGTCGA CGTGCGCATC GACAGCTTCC ATGATGTCCG CCTGAAGGGG
CATGTCGACA GCCTGTCGCC AGCCAGCGGC CTCGAATTCG CACTGCTGCC GCCCGACAAC
GCCACCGGCA ACTTCACCAA GATCGTGCAG CGCGTGCCGG TGAAGATCGT GCTCGACGAT
CATCGCCTCG CCGGGCTGCT GCGTCCGGGC ATGTCGGCGG AGCCGACGGT GAACACCAAG
TCGGAAGCTG TCGCCGCACA TGGTCCGGAT AGCATCGCCA GACACCTTGT CGCCAATCCG
GAGCAGCCGG GATCCTGA
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| Protein sequence | MTAISYVVDL PAKTTLRLSR QAIRRAALAV AAAVGVAGIV HFGYDYWTVG RYLESTDDAY
VKADSTIIAP KVSGYIDRVL VSDNQPVKAG QVLARIDDRD FRTALDQAHA DVVAAEAAVS
NLDAQIALQQ PMIAQQTADV AAAEAGLKFA SEEQARYDGL MKTGSGTVQR AQQTDAALHE
KTAQLQHGQS ALLAAHKKVD VLTTERSKAV AQVARAHAVE RQMALNLSYT TITAPVDGTV
GARALRVGQY VTAGTPLMAV VPLDAVYIVA NFKETQLTHV RQGQPVDVRI DSFHDVRLKG
HVDSLSPASG LEFALLPPDN ATGNFTKIVQ RVPVKIVLDD HRLAGLLRPG MSAEPTVNTK
SEAVAAHGPD SIARHLVANP EQPGS
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