Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Nham_3000 |
Symbol | |
ID | 4032573 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Nitrobacter hamburgensis X14 |
Kingdom | Bacteria |
Replicon accession | NC_007964 |
Strand | + |
Start bp | 3305134 |
End bp | 3305925 |
Gene Length | 792 bp |
Protein Length | 263 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | 637971433 |
Product | two component LuxR family transcriptional regulator |
Protein accession | YP_578215 |
Protein GI | 92118486 |
COG category | [K] Transcription [T] Signal transduction mechanisms |
COG ID | [COG2197] Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.42213 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGGAGGC ATCAAACCTT TGAAACCATT CTCATAGGAA AGGGTATTTT AATTAGAGAG GGCATTGCCC GAATTTTGCG TGCGGAGAAC TTTCGTGTCC GGGCATCGGT ATCATCTCCT GATGAATTGA CAGGTGGATT TCGAGGGCCG CAACTGTTGT TTCTGATTGT CCATACCAGC GATGACTTTG ATCTCGCCGT TGAACAGATC AACCTTGTGA GAAATCAATA TCCGAGCGGG CGCATTGTAG TTGTGGCGGA TCACTATAAG TCAACCGAGC CGGATTTAGT ATTTCAGGTC GGCGCCGCCG GTTATCTTGT AAGCACGATG TCCTGCGATG CGTTCGTCAA ATCCATCGAG TTGGTGATGA TGGGTGAGAC GGTTTTCCCG CCGGCATTCC TGGCATCATC TCCCGATACC AAGAGCGAGC CTCGACGAAA AGCCGCGGTC TCCGGCGAAG ACGCGATCCT CGTCGCCCGA GAGGATGCGA CCGCGCCGCA GCTTTCTCCA AGAGAGCTGG CAATTCTGCG GTGTCTGATC AGTGGCAATT CCAACAAGTG CATTGCGCGA AAGATCGATA TCGCAGAGGC AACCGTAAAG GTCCACGTCA AGGCGATTCT GCGCAAGATT CGGGCCCAGA ATCGAACGCA GGCTGCGATT TGGGGGATGA ACCATCCGCT ACTGGCACAA CCGATAAACG GTATTCCCCA TCTCCCAATC GCCGATGCAA ACGAGCCGCT TTCAAGCTCC GTCGCGGTGA TCTCGGCGAT AAAGCGAATT GGGTCGTCAT GA
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Protein sequence | MRRHQTFETI LIGKGILIRE GIARILRAEN FRVRASVSSP DELTGGFRGP QLLFLIVHTS DDFDLAVEQI NLVRNQYPSG RIVVVADHYK STEPDLVFQV GAAGYLVSTM SCDAFVKSIE LVMMGETVFP PAFLASSPDT KSEPRRKAAV SGEDAILVAR EDATAPQLSP RELAILRCLI SGNSNKCIAR KIDIAEATVK VHVKAILRKI RAQNRTQAAI WGMNHPLLAQ PINGIPHLPI ADANEPLSSS VAVISAIKRI GSS
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