Gene Nham_2413 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNham_2413 
Symbol 
ID4030626 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrobacter hamburgensis X14 
KingdomBacteria 
Replicon accessionNC_007964 
Strand
Start bp2671895 
End bp2673097 
Gene Length1203 bp 
Protein Length400 aa 
Translation table11 
GC content64% 
IMG OID637970872 
Productphage integrase 
Protein accessionYP_577663 
Protein GI92117934 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.786857 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCCGCGTC CCAGCAAAGG CCCCCGACTT GCCCTCCAAA GATCCAGCGA CCGGCATCCA 
ACCTGGGTCA TCCGAGACGG ACAACGGACC CTCGGCACTG GCTGCGATGA ACGCGATCGC
GGAGGGGCTG AAAGAAAACT TGCGGCCTAC ATCCTCAAAA AGCACAACCC GCAAAAAGCG
ATCAGCCAAA GTGATCCGAA TAGCATCAAG ATAGCGGATG CCCTCGCTGT CGAGATTATG
CGCATCGCGG CTTCATCAAT GCCGGCGCAC CGCAAGCGCG AATTGATCAC CGTTTGCCAG
AACATGGGAA ACTGGTTTGG TGACCGCACT GTAGGCGACC TCGATGGCGA GTTGCAGCAA
GAATACGCCG CGCAGCGCAA CGCCTCAGTC ATGAAAAAGG TCGGCGAGAA GCGGATTGTG
GTCGGGACCG ACCTGCCCGC CCCAAGCGCC GCCTACCGAG ATCTGAAGAT CCTCGCCGCC
GCGATCAACC GGCACATCAA GCACAAGGTC GGCGGGGTGC AGGCCAAATT CCGGCCGGTG
CTGCCGGCGC CGTCGAAGGC GCGCGAGCGC TGGCTGACCC GGGACGAGGC TGCCCGCTTG
ATCTGGGCAG CCTGGCGCGC GCGGCAGAAG TCGAACGGGT TCGGCCGGCG CGGCCAGCTC
ACCGCCCGCC ATGTCGCCCG CTATATCCTG GTGGGCATCT ACACCGGCAG TCGGAATGGC
GACATCTGCA ACGCAGCGGT GATGCCGACG ATCGGCCGCG GCTATGTCGA TCTCGACAGC
GGCATCTTCA AACGGAAGCC GGACAACAAG GAGGCGACCA GCAAAAAGCA GCCGACAGTT
CCGCTGCCGC CGCGGCTGCT GGCTCACATG CGCCGCTGGA AGCGCCTGGG TATCTCAGAG
CATTCGGTGA TCGAATGGCA GGGCCGGCCG GTGTCGGTCG TTAAAGAGGC GTGGGCCACG
ACCGTAAAGG CGGCAGGGCT CGACACGGAC GTGAAGGAGC GTAAGATTCT GCGCCATACC
CTCCGGCACA CGGCGATCAC CTGGTATCTG ACGCCGGACC GGCGGACCGG CCGGGCCGTC
GATATTGAGA CGGTGAGCCT TTATTGCGGG GTATCCGTCG CCACGATCCG GAAGACGTAC
CGGCACGTCA TGCCGGGAAC CTTCGACACC TTGCTCGGCG CCGCGCAGAC GTTCGGACGT
TAA
 
Protein sequence
MPRPSKGPRL ALQRSSDRHP TWVIRDGQRT LGTGCDERDR GGAERKLAAY ILKKHNPQKA 
ISQSDPNSIK IADALAVEIM RIAASSMPAH RKRELITVCQ NMGNWFGDRT VGDLDGELQQ
EYAAQRNASV MKKVGEKRIV VGTDLPAPSA AYRDLKILAA AINRHIKHKV GGVQAKFRPV
LPAPSKARER WLTRDEAARL IWAAWRARQK SNGFGRRGQL TARHVARYIL VGIYTGSRNG
DICNAAVMPT IGRGYVDLDS GIFKRKPDNK EATSKKQPTV PLPPRLLAHM RRWKRLGISE
HSVIEWQGRP VSVVKEAWAT TVKAAGLDTD VKERKILRHT LRHTAITWYL TPDRRTGRAV
DIETVSLYCG VSVATIRKTY RHVMPGTFDT LLGAAQTFGR