| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Nham_1900 |
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| Symbol | |
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| ID | 4033038 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nitrobacter hamburgensis X14 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007964 |
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| Strand | - |
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| Start bp | 2115175 |
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| End bp | 2116767 |
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| Gene Length | 1593 bp |
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| Protein Length | 530 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 637970366 |
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| Product | thymidine phosphorylase |
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| Protein accession | YP_577168 |
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| Protein GI | 92117439 |
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| COG category | [F] Nucleotide transport and metabolism |
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| COG ID | [COG0213] Thymidine phosphorylase |
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| TIGRFAM ID | [TIGR02645] putative thymidine phosphorylase |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGAGTTC CGGGATGCAC GTTAAGGCTG ATCCATTATG TCAGTCCGCA GGTCCTAAAC
ATGAATGGTA CCGATCTTCC TCGGCTTCAG CCGAAGATCC GTCGTGTCAA TCTCGATACC
GGCCGCGAAA ATGTCGTCGT CATATCGCGG CACTCTGCAG CCCTACGACC GGAAATATTT
CGGGGCTTCA GTCGCGTGGA GCTCCGTCGG AATGCCAAGA TCATGTTGGC CACGCTCATT
ATTACCGACG ACGACTCGTT GGTGGGCCCT GACGACCTAG GACTTTCCGA GCCGGCATTC
CGGCGCTTCG CAGAGCCCGT GGGCAGCGCG GTAACAATAG CGCCGGCAGC ATCTCCGGCC
AGCCTCGATG CGGTGCGCGC CAAAATCATG GGGCAAACCT TCAGCGCAGT CGACATCAGC
GCAATTATCG ACGATCTCAC CCATTATCGG TACTCCGACA TGGAGATAGC TGCATTCCTG
ATCAGTTCTG CCAGCTTCAT GACAAATGGC GAACTGATTG CTTTGGTCGA TTCGATGGCC
CGGGCCGGTA CGCAACTCAA ATGGAGAAAT CCGATTATTG TCGACAAACA TTGCATCGGT
GGCATTCCCG GAAATCGCAC ATCCATGATT GTGGTGCCGA TCGTGGCAGC TCACGGCCTC
ACGATTCCAA AGACGTCGTC CCGAGCTATT ACGTCCCCCG CCGGTACGGC AGATACGATG
GAAATGCTGG CGCGTGTCGA TGTCGGCGTT GAAGAAATGA AAGACATCGT AGCTGCATGC
CGCGGCTGTC TGGTGTGGGG CGGACATGTC AATCTGTCCC CGGCGGACGA CATCCTGATT
TCTGTTGAGC GGCCACTTGG CCTCGATACT CGCGAGCAAA TGGTAGCTTC TATTCTGTCA
AAAAAGCTCG CCGCCGGCTC AACCCATCTC CTGATTGACT TGCCTGTCGG TCCGACCGCC
AAGCTCGTCA ACGAGATGGA AGCGATGAGG CTCCGCAAAC TGTTCGAATT CGTCGGCGAT
CATTATGGAA TATCCGTCGA GGTTGTCGTT ACCGATGGTC GCCAGCCGAT CGGCAATGGC
ATTGGTCCCG TTCTTGAGGC GCAGGATGTT ATGGCGGTTC TAGCCAATGA TCCGGAAGCA
CCAGCAGACC TGCGCGAAAA ATCTTTGCGG CTTGCCGCAC ACTTACTCGA ATATGACCCC
AAGCTGCGTG GCGGCAGCGG TTATGCACGC GCCCGCGAAC TGCTCGATAG TGGCGCCGCG
CTCAAACAAA TGCAAAAGAT CATCGACGCG CAAGGGCCTC CGACCTGTTG CACAGATTTG
GGGAATTTGA CGTTCGATGT CACAGCCTCA CGCGATGGCT TCGTTTCAGG CATCAACTGC
CTGCAGTTGA ACCGGCTTGC ACGAATCGCG GGAGCGCCCA TCGATAAAGG CGCCGGCATC
AGACTATTCA AGAAAATTGG CGACCGTGTC CAGCAAGGAG AGCCGCTTTA CCGCATCCAT
GCGTTCGAGC GGTCGGGGCG CGATCTTGCC GCCGCCGGCA CAACGGCCTA CACGATCGAC
AGCGAGGAAT CCAACCTGGA AGCGACGCCG TGA
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| Protein sequence | MRVPGCTLRL IHYVSPQVLN MNGTDLPRLQ PKIRRVNLDT GRENVVVISR HSAALRPEIF
RGFSRVELRR NAKIMLATLI ITDDDSLVGP DDLGLSEPAF RRFAEPVGSA VTIAPAASPA
SLDAVRAKIM GQTFSAVDIS AIIDDLTHYR YSDMEIAAFL ISSASFMTNG ELIALVDSMA
RAGTQLKWRN PIIVDKHCIG GIPGNRTSMI VVPIVAAHGL TIPKTSSRAI TSPAGTADTM
EMLARVDVGV EEMKDIVAAC RGCLVWGGHV NLSPADDILI SVERPLGLDT REQMVASILS
KKLAAGSTHL LIDLPVGPTA KLVNEMEAMR LRKLFEFVGD HYGISVEVVV TDGRQPIGNG
IGPVLEAQDV MAVLANDPEA PADLREKSLR LAAHLLEYDP KLRGGSGYAR ARELLDSGAA
LKQMQKIIDA QGPPTCCTDL GNLTFDVTAS RDGFVSGINC LQLNRLARIA GAPIDKGAGI
RLFKKIGDRV QQGEPLYRIH AFERSGRDLA AAGTTAYTID SEESNLEATP
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