Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Nham_1405 |
Symbol | |
ID | 4032323 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Nitrobacter hamburgensis X14 |
Kingdom | Bacteria |
Replicon accession | NC_007964 |
Strand | + |
Start bp | 1591912 |
End bp | 1593471 |
Gene Length | 1560 bp |
Protein Length | 519 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 637969879 |
Product | major facilitator transporter |
Protein accession | YP_576687 |
Protein GI | 92116958 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG2814] Arabinose efflux permease |
TIGRFAM ID | [TIGR00711] drug resistance transporter, EmrB/QacA subfamily |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAACACAG TCGAGCGCCC CGGTCGGGGG CCGTCCGCCC CCCCGATTCG GTCTGGCAAC ATCTCCCGCG AAGTCGCCGC GCGTCACGGC CCGGCCGCTG GCGACGCCGA TGCGTCGACG GTCGCGCCGC CCGTGCCGCT GAGCCAGAGC GAAGTCCGCA CCATCCTGGC CAGCCTGATG CTGACGATGT TCCTGGCCGC GCTCGACCAG ACCATTGTCG CAACCGCGCT GCCGACCATC GGCCGCCAGT TCCACGACGT CACCACCCTG TCGTGGATCA TCACGGCGTA TCTGCTGGCG TCGACCGCGG TCGCGCCGCT GTTCGGCACG CTGAGCGACA TCTACGGCCG CCGCGCCATG ATCGTCACCG CACTCGGTCT GTTCGTCGCG GGCTCGGTCT TGTGCGCGCT GGCGCCGAAC ATGACGACGC TGATCGTCGC GCGCGGGGTG CAGGGCCTCG GCGGCGGCGG CATCCTGCCG GTGGTGCAGA CGGTGATCTC CGATGTGGTG ACGCCGCGCG AGCGCGGCCA GTATCAGGCC TATTTCAGCG GCGTGTGGAC CGCGGCCGGC ATCGCCGGAC CGGTGCTGGG CGGTGTGTTC GCCGAGCACC TGCATTGGTC GATGATCTTC TGGATCAATG TGCCGCTCGG CGTCGTCTCG CTGGCGATGC TGCTGCCGAA GATGGGAAAG CTCCCGGTGT TCCACCGTCG CCGCAAGGTG GACTGGGCCG GCGGCCTGCT GCTGATGGCG TCCGCCGTGG TGTTCATGCT GGTGCTGACA TGGGGCGGCA ACCGCTTCGC CTGGCTGTCG CCGGCAATCG CCGCCATGCT CGGCGGCTCG CTGGTGCTTG CCGCCGTCTT CGTCTGGCAC GCGCGGACGA CGCCCGAGCC GTTCCTGCCG CTGTCGCTGA TAGGCGGCCC GGTTGTCCCC TACGCGATCG CGGCCGGCGC CTTCGCGCTC GGCTCCATCA TCGGGATCAC CGTGCATCTG CCGCTGTATT ATCAGGTGGT CCATCATCTC AGCGCCAGCG AATCGGGGCT GGCGTTGATT CCGATCGCCG CGATCTCGAC CGGCGGCGCG GCGCTTGCCG GCCGCACCAT GGTGCGGGCG GTTCACTACA AGCGGGTCGC GATCGTCGGG AACGCATTCG CCGCCGTCAT CGCCGCGATC CTGGCGATTG TCGTGATGCC GTTGTGGCCG CTGCTGGCGC TGCTCTCGCT GTTCGCCTTC GGTCTCGGCA CCACGTTTCC CGTCAGCGTG GTGTCGCTGC AGAACGCGGT GGCGCGGCCG CAGGTCGGCA CCGTCACCGG CGCGATGAAT TTCTTCCGCG CGCTGGCCGC GTCGTTCACC GTCGCCGCAT TCTCCGCCAT CCTGTTGATG GCGCTGGGTG CGGATGTCTC GATCGGCAAT GACGGCGGCG GTCAGGTCGA TGCGATCTCC GCGGCCGATC TGACGGCGGC ATTCCGCTAC GTGTTCGCCG CCGCCGCAGC GATGCTGGCG GGCGCGGCGC TACTGCTGAC GCTGATGGAG GAGCGGCCGC TCGCCGGCCC CGCGGTGTGA
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Protein sequence | MNTVERPGRG PSAPPIRSGN ISREVAARHG PAAGDADAST VAPPVPLSQS EVRTILASLM LTMFLAALDQ TIVATALPTI GRQFHDVTTL SWIITAYLLA STAVAPLFGT LSDIYGRRAM IVTALGLFVA GSVLCALAPN MTTLIVARGV QGLGGGGILP VVQTVISDVV TPRERGQYQA YFSGVWTAAG IAGPVLGGVF AEHLHWSMIF WINVPLGVVS LAMLLPKMGK LPVFHRRRKV DWAGGLLLMA SAVVFMLVLT WGGNRFAWLS PAIAAMLGGS LVLAAVFVWH ARTTPEPFLP LSLIGGPVVP YAIAAGAFAL GSIIGITVHL PLYYQVVHHL SASESGLALI PIAAISTGGA ALAGRTMVRA VHYKRVAIVG NAFAAVIAAI LAIVVMPLWP LLALLSLFAF GLGTTFPVSV VSLQNAVARP QVGTVTGAMN FFRALAASFT VAAFSAILLM ALGADVSIGN DGGGQVDAIS AADLTAAFRY VFAAAAAMLA GAALLLTLME ERPLAGPAV
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