Gene Nham_1215 details

Gene Information

• Locus tag: Nham_1215
• ID: 4032267
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Nitrobacter hamburgensis X14
• Kingdom: Bacteria
• Replicon accession: NC_007964
• Strand: +
• Start bp: 1371883
• End bp: 1372557
• Gene Length: 675 bp
• Protein Length: 224 aa
• Translation table: 11
• GC content: 64%
• IMG OID: 637969694
• Product: tetratricopeptide TPR_2
• Protein accession: YP_576503
• Protein GI: 92116774

Plasmid Coverage information

• Num covering plasmid clones: 20
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGCCACAGA GATTCCCCGC GATCGGGTGG TTTTGCCTCG CAATTCTGCT CGCCGTCGCT 
GGAGCCCTGA TGCCTGCGGT CGCGTCCGCC CAGGCTCCGC CGCACAGCGG CCCGCAGCTT 
GCGCCGCCCG AGACCGCTCA GCCCAACGAG TTGCCGGAGC CGACCTCGAA GCTACCGGGA 
ATCCCCAAGG ATCAGGTCCG CGGACTCGAT TTCCTGTTCG GCGCTCTCAA GGCCGCACCG 
GACGAGGAGA GCGCGAGCCA TGTCGAAGCG CGGATCCTGG CGCTGTGGAG TCGGACTTCG 
AGCGACACGA CGGTACTTTT GATGCAGCGG GTGAAGGTTG CGACGGACGC CCAACAGTTC 
GGCATTGCGC TCAAGTTGCT CGACGCGGTG TTGAATCTGC ATCCCGATTA CATCGAGGGA 
TGGAGCCAGC GGGCGACACT GTACTACATG CGGAACGACT ACCAGCGTTC GCTTGAGGAC 
ATCGAGCAGG TGTTGATCCG CGAGCCGCGC CACTTCGGGG CGCTCGCAGG TCTCGGCATG 
ATCATGCAGG AGCTTGGCGA CGACAGGCGC GCGCTCGATG CCTTCCGCAA GGCGCTCGCC 
GTCAATCCCC ATCTCGCGAA CGTGCGGGAG CTGGTCAAGA CGCTGACCGA AAAGGTCGAG 
GGGCGCGATA TCTGA 

 

Protein sequence

MPQRFPAIGW FCLAILLAVA GALMPAVASA QAPPHSGPQL APPETAQPNE LPEPTSKLPG 
IPKDQVRGLD FLFGALKAAP DEESASHVEA RILALWSRTS SDTTVLLMQR VKVATDAQQF 
GIALKLLDAV LNLHPDYIEG WSQRATLYYM RNDYQRSLED IEQVLIREPR HFGALAGLGM 
IMQELGDDRR ALDAFRKALA VNPHLANVRE LVKTLTEKVE GRDI