Gene Nham_0500 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNham_0500 
Symbol 
ID4029928 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrobacter hamburgensis X14 
KingdomBacteria 
Replicon accessionNC_007964 
Strand
Start bp552344 
End bp553423 
Gene Length1080 bp 
Protein Length359 aa 
Translation table11 
GC content66% 
IMG OID637969028 
Producthypothetical protein 
Protein accessionYP_575850 
Protein GI92116121 
COG category[S] Function unknown 
COG ID[COG4246] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGCAAAAGC GAGTGTCGAG TCAGCCCGGT CGCCGCGCCG TTCTCAAATG GGGCGCAACC 
ATCGCCTCTT TCGCGATTAA TCCTGCCGCC CGCGCGCAAT TCGCAACGCA CCCGCGGAAG
CAGCCGGCGC CGGACGAACT AACGCCTCCG GCGCCGGTGT CTATCACCGT CAACGCGCGT
CCGATTTCCT CCTTCGATCT GCGCGACCGC TCGCGCACCC GTTTTGGCGC GCTCGCCTTT
CGGAGCGGCC TGATCCTGAC CTCGTCATTT CGCGGCTTCG GAGGGCTGTC GAGCCTGCGG
CTCGACCCGA AAGGGCAACG ATTCATTTCC GCCAGCGACA AGGGCACATG GATCACCGGC
CGCATCGTCT ATGGGGCCAG GGAGATGACC GGGCTCGCCG ATGTCGAGGC CGCGCCGATG
CTGGGTCACG ACGGTAGGCC GATAACCGCG CGCGGCTGGT TCGACACCGA GTCGATCGCG
CTCGACGGAT CGCTGGTCTA TGTCGGCATC GAGCGGGTCA ACCGGATCAT GCGGTTCGAT
TTCGGCAAGG GGTTTACGCG GGCGCGCGGC GAGGATGTCG AGGTGCCGCC GGCCATTCGC
AAGCTGCCGT TCAACCGGGG GCTGGAGGCG ATGGTGGTCG TTCCCTGCGA CAGGCCGCTC
GGCGGCACGC TGATCGCGAT CTCCGAGCGC GGCCTCGACG CCGGCCGCAA TATCGTGGCG
TTCCTGATCG GCGGGCCGTC GCCGGGCCGG TTCTCCATCC GCCGGACCGA CAATTTCGAC
ATCAGCGATG CCTGCCTGCT GCCCTCGGGC GACCTGTTGA TCCTCGAACG CAAGTTCTCG
CTGATCGGCG GCATCGGCAT CCGCATCCGG CGCATCGCGA TCAATGCGAT CGCGCCCGGC
GCGCTGGTCG ACGGCCCCTC GCTCTTCGAG GCGGACCTCG GGCAGGAGAT CGACAATTTC
GAAGGCCTGG ATGCGTTCGT GAACGATAAC GGCGACATCG TCCTGACGCT GGTGTCCGAC
GACAACTTTT CGCTGATCCA GCGCACGCTG CTGCTGCAGT TCACACTGGT CGAGGATTGA
 
Protein sequence
MQKRVSSQPG RRAVLKWGAT IASFAINPAA RAQFATHPRK QPAPDELTPP APVSITVNAR 
PISSFDLRDR SRTRFGALAF RSGLILTSSF RGFGGLSSLR LDPKGQRFIS ASDKGTWITG
RIVYGAREMT GLADVEAAPM LGHDGRPITA RGWFDTESIA LDGSLVYVGI ERVNRIMRFD
FGKGFTRARG EDVEVPPAIR KLPFNRGLEA MVVVPCDRPL GGTLIAISER GLDAGRNIVA
FLIGGPSPGR FSIRRTDNFD ISDACLLPSG DLLILERKFS LIGGIGIRIR RIAINAIAPG
ALVDGPSLFE ADLGQEIDNF EGLDAFVNDN GDIVLTLVSD DNFSLIQRTL LLQFTLVED