Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ndas_5188 |
Symbol | |
ID | 9249081 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111 |
Kingdom | Bacteria |
Replicon accession | NC_014211 |
Strand | - |
Start bp | 328984 |
End bp | 329646 |
Gene Length | 663 bp |
Protein Length | 220 aa |
Translation table | 11 |
GC content | 73% |
IMG OID | |
Product | transcriptional regulator, TetR family |
Protein accession | YP_003683074 |
Protein GI | 297564101 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.375303 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCCAAGG GCGGCGGAGG ACGGCGCACG AGCGAGGAGA CCAGGGAGCG GCTCCTGGCG GCGGCCAGCG AGGTCGTGCG CGAGGAGGGC TACGCCGGGG CGTCGGCGCG CGCCATCGCC GCGCGCGCGG AGGCCAACTC GGCGCTGGTC TTCTACCACT TCGGCGGGGT CGACCAGCTG CTGCTGGCGG CGCTGGACCG CTCCAGCGCC GAGCGCATGG CCATGTACCG GGAGATCGCG GCGCGGGCGA ACACCCTGGA GGAGCTGGTG GAGGCGGCGA TGCTCATCTA CCGGACCGAC CTGGAGCGCG GCTACATCAC CGAGTTCTCC GAACTGGTGG CCGCCGCCGT CACCAAACCG GAGCTGCGCA CGCAGATCCG GGACCGCTCG GAGCCGTGGA TCGCCTTCAT CGAGCAGGAG TGGAACCGCG TCCTGGGCGG ATCCGCCCTC GGGAAGCTGC TGCCCGCCCG CGAGGTGGCC TACGGAGCGA TCACGTTCTA CCTGGGGGTG AACCTGTTCT CGGTGCTCGA CGAGGACCAC TCGCGCACCG AGGCGGTGTT CGACCTGGCC CGCGGGCTGG CCCCCCGGGC CAAGCTCCTG ACGCTGCGCC TGCCGCGCCG CGACCGGGGG GTAGGCTCGC CCGCGGACGA GGAGGACGCA TGA
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Protein sequence | MAKGGGGRRT SEETRERLLA AASEVVREEG YAGASARAIA ARAEANSALV FYHFGGVDQL LLAALDRSSA ERMAMYREIA ARANTLEELV EAAMLIYRTD LERGYITEFS ELVAAAVTKP ELRTQIRDRS EPWIAFIEQE WNRVLGGSAL GKLLPAREVA YGAITFYLGV NLFSVLDEDH SRTEAVFDLA RGLAPRAKLL TLRLPRRDRG VGSPADEEDA
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