Gene Ndas_4946 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNdas_4946 
Symbol 
ID9248833 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNocardiopsis dassonvillei subsp. dassonvillei DSM 43111 
KingdomBacteria 
Replicon accessionNC_014211 
Strand
Start bp84352 
End bp84930 
Gene Length579 bp 
Protein Length192 aa 
Translation table11 
GC content72% 
IMG OID 
Producttranscriptional regulator, TetR family 
Protein accessionYP_003682835 
Protein GI297563862 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAGGGCAC CGGTCGGGGA AGGCAGGGAG CGCCTCCTGC AGGCGCTGTT CGAGGAGTAC 
GGCGGGAGCG GCCCCAGCCC GAGCCTGTCG ATGCGCCAGG TGGCGGAGCG GCTCGGCGTA
CACCACACGC TGCTGACCTA CCACTTCGGG TCGCGGCCGG GACTCCTGCG CGCCGTGCTG
CTGGAGGCGC GCCGCCGCGA CAACCTCGTC ATCGCCGCGA CCGGCGGCGA ACTCGGGTTC
GCCGCCCTGT GCAGGGCCGT GTGGAGCTTC TACGCGAACG ACGCGCACGA GGACCGGATC
CGCGCCTTCT TCCACCTGGT CGGACTCGCG GTGTACGAGC ACGACGTCTT CCATGAGTTC
GTCGCCGACA TCGACGACCT GGCGTCCCTC CTCGAAGCGG CCGCCCTTCG CGACGGACAC
ACGGCGGCGG ACGCGAGGCA GCGGAGCATC ATCGCGACCT CGTGCCTGCG AGGGCTGTTG
CTGCAGAGGC TGCTGGCCCC CTCCGCCGAG GTCGACGCCG CGGCCGAGCG CTTCATCACG
TCGTTGGCGG CGTCCGGGGG CGACAGCCCG GCGTCGTGA
 
Protein sequence
MRAPVGEGRE RLLQALFEEY GGSGPSPSLS MRQVAERLGV HHTLLTYHFG SRPGLLRAVL 
LEARRRDNLV IAATGGELGF AALCRAVWSF YANDAHEDRI RAFFHLVGLA VYEHDVFHEF
VADIDDLASL LEAAALRDGH TAADARQRSI IATSCLRGLL LQRLLAPSAE VDAAAERFIT
SLAASGGDSP AS