Gene Ndas_4345 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNdas_4345 
Symbol 
ID9248220 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNocardiopsis dassonvillei subsp. dassonvillei DSM 43111 
KingdomBacteria 
Replicon accessionNC_014210 
Strand
Start bp5178868 
End bp5179275 
Gene Length408 bp 
Protein Length135 aa 
Translation table11 
GC content66% 
IMG OID 
Producttranscriptional regulator, XRE family 
Protein accessionYP_003682240 
Protein GI297563266 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0197394 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value0.880673 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGGCGC GTAGTTGGCG AGAGATCCAA GCGGAGTCCG AAAAGCAGGA CCCCTGGTTC 
GCCTCTGAGG AAGCCCAGGC TGTCTTCGAT GCGGAAACCG CCCGTATCGA AGCCGAGCGT
CAGGGTTACG CGCTCTCCTC CCTGCGCAAG GAGAGCGGAA GGACCCAGAA GGAGGTCGCC
CAGATCATGG GAGTGAGCCA GGCGCGGATC TCCCAGATCG AGCACGGGCG GATCGACAGC
CTGGAACTCC TGCGGTCCTA CATCAGCGCC ATCGGCGGCG AACTGCACCT GAGGGTTGAT
CAGGGTCCGC TGAGCGTCAC GCTCGACATC CCCGGAAGCG ACGCCGCTGC CGCGACCGGA
ACCGCGGAGG AGGCCGACGC CTCCGCGGAC AAGCGAGACG CCGCGTGA
 
Protein sequence
MKARSWREIQ AESEKQDPWF ASEEAQAVFD AETARIEAER QGYALSSLRK ESGRTQKEVA 
QIMGVSQARI SQIEHGRIDS LELLRSYISA IGGELHLRVD QGPLSVTLDI PGSDAAAATG
TAEEADASAD KRDAA