Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ndas_4253 |
Symbol | |
ID | 9248127 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111 |
Kingdom | Bacteria |
Replicon accession | NC_014210 |
Strand | + |
Start bp | 5070763 |
End bp | 5072457 |
Gene Length | 1695 bp |
Protein Length | 564 aa |
Translation table | 11 |
GC content | 76% |
IMG OID | |
Product | integral membrane sensor signal transduction histidine kinase |
Protein accession | YP_003682148 |
Protein GI | 297563174 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.452469 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 0.374196 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCGGGAGA TCCGGAGAGA ACCGCGCGGG TGGGCCCGTC CGGCCTTCGA GGCCGCGCTG TGGGCCCTTC TGGGCGCGCT GATCGTGATC GAGCTCTCCG GGGTCCGCGA CCGGCCGCCG GTCCTCGAAG CGTGCCTCCT GCTGGCCGCC CTGGCCGTCG CGGCGGCCCT GTCCCGTCCC CTGCCGTTCG TCTCCCTGGG CGTCATGCTC AGCGGGGCGG TCCTGCAGAC GTCCGCCTCG GGGTTCCTGG TGGTGGAGAC CACCGTGATC TCGCCCTGGC TGGCCGTGGC TGTGCTGGCG CTGCTCACCG GCCTGCGCTC GGAACGGGTG CGCCCGGTGG TGACGATGGT GGTCGTGGCG TGCTCGTTCA CCCTCGTCCT GCACCTGTCG GCGGGGCTCG TGTTCGGTGC GGGCGTCCGC GCGTTCCTGT CCGACTCCGT GGACTGGCTG GGCGTCGTCC TCGTCATCGC GCTGAGCACG CTCACCCCGT GGCTGTTCGG CCGCTACCAG CGCCTGCGCC GCCGGGTGTG GCGGGGCGGC TGGGAGATCG CCGAACGCAT GGAGCGGACC CGCGCGGCCG AGGCCGACCG CGCCCGTCTG CGGGAGCGCG CCCGGATCGC GACCCGGATG CACGACTCCC TCGGCCACGA CCTCGCGCTG ATCGCGGTGC GCGCGGCGGC CCTGGAGATG ACCGCTCTTG AGGACTCCGA GCAGGGCCGG GCAGCCGGTG AGCTGCGCAC GGCGGCGCAC GAGGCCAACC TGCGGCTGCG GGAGATCATC GGGGTGCTGC GCGAGGACGA CGGTGGCGAC GGCCACGGTG AAGCCGCTTC CGGACCGGGC GCGGGCGGTC CGAAGGCAGG CGCGCTGAAC ACGGACGATC CGGGCACGGG CGAGTCGGTG GCGGCCCTGG TGCAGCGCGC CTCGGACGCC GGTATGCGGG TCCGGCTGCT GCGGGAGGGC CCCGATCCGG ATCCCGCCGC CCCGGGTGGC GGCGCCGTGC ACCGGGTGGT CCAGGAGGCG CTGACCAACG CGGCCAAGTA CGCGCCGGAG GCGGAGGTGA CCGTGCGGGT GGTCCGCGAG TCCGACCGGA CCCGGGTGTC GGTCAGCGAC ACCGGACCGC CCGGGGCCGT GCGGACGGTC CTGCCCGCGC GGAGCGGGGG CGGGTCCGGC CTGGCCGGGC TGCGTGCGCT GGTGGAGGAG CTCGACGGGA GCTTCGCCGT GGGCCGGGGG GAGGGCGCGG GGTTCACCGT CCGGGCGACC GTGCCCGACC CCGGCGCCGA GGGCGGGGCG GAGGAACTCG GGGAGTCGGA GACGCACCGC GCTCACAGCG AGGCCCGCGC CCGCGCGCGG CGCCGACTGG TGGCCGCCGT GGCCGTTCCG GCCGCGCTGG GCCTGGGGCT GGCGGCGGTC GGCCTGGGCC TGCTGTCCTG GGTGGGCGTC AACACCGTCC TGTCTCCGGA GCGGTACGGG CGGTTGACCG TGGGGGACGA CCGGGAGCGG GTGGAGGAGG TGCTCCCCCG GTTCTCCTAC CCCGAGCACT CGGTGTCGGC CCGGGCCTCC GAACCGCCCG CGCCGCCCGG TGCCCGGTGC CTCTTCTACC TGTCCCGGTA CGAGAACGGG CTGCCGCCGG TGTACCGGCT GTGCTTCGAG GACGGTGTCC TGGTCGCCAA GGACGAGCTC CAGCGGACCG ACTGA
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Protein sequence | MREIRREPRG WARPAFEAAL WALLGALIVI ELSGVRDRPP VLEACLLLAA LAVAAALSRP LPFVSLGVML SGAVLQTSAS GFLVVETTVI SPWLAVAVLA LLTGLRSERV RPVVTMVVVA CSFTLVLHLS AGLVFGAGVR AFLSDSVDWL GVVLVIALST LTPWLFGRYQ RLRRRVWRGG WEIAERMERT RAAEADRARL RERARIATRM HDSLGHDLAL IAVRAAALEM TALEDSEQGR AAGELRTAAH EANLRLREII GVLREDDGGD GHGEAASGPG AGGPKAGALN TDDPGTGESV AALVQRASDA GMRVRLLREG PDPDPAAPGG GAVHRVVQEA LTNAAKYAPE AEVTVRVVRE SDRTRVSVSD TGPPGAVRTV LPARSGGGSG LAGLRALVEE LDGSFAVGRG EGAGFTVRAT VPDPGAEGGA EELGESETHR AHSEARARAR RRLVAAVAVP AALGLGLAAV GLGLLSWVGV NTVLSPERYG RLTVGDDRER VEEVLPRFSY PEHSVSARAS EPPAPPGARC LFYLSRYENG LPPVYRLCFE DGVLVAKDEL QRTD
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