| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ndas_4245 |
|---|
| Symbol | |
|---|
| ID | 9248119 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_014210 |
|---|
| Strand | - |
|---|
| Start bp | 5060047 |
|---|
| End bp | 5060913 |
|---|
| Gene Length | 867 bp |
|---|
| Protein Length | 288 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | |
|---|
| Product | transcriptional regulator, XRE family |
|---|
| Protein accession | YP_003682140 |
|---|
| Protein GI | 297563166 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 24 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 12 |
|---|
| Fosmid unclonability p-value | 0.116487 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCCGCAGG AGCAGCACGG CCCGATCGCC AGCCGCCTTC TCCTCGGCAA GGCCCTACAG
CAACTGCGAA ACGAAGTCGG CATGAGTGGG GCCGAGGTCG CCAAGGAGAT GGGCTTCGGA
GCCGCCAAGC TCTCCAAGAT CGAGCGCGGT CAGGCCCCCA TCACCAAAGC CGACCTCCAC
CTGTTCTTCG AGGTGCTCAA GGTCAGCGAG GACGTGCGCC CCACCCTGCT CGAACTCGGA
GCACAGTCCC GCAGGCCACG GCGCAACCGC ACCAACACCT TCGAACAGGA GCTACCGGGC
AAGAACTTCG AGAGGTACTT GGGACTCGAA GAGATCGCGG TCGGCATCAA GGACTGGCAC
CCGTATCTGA TCCCCGGTCT TCTACAGACC CCCGAGTACG CCCACGCCCT GATCTCCGCG
AACCCGCTAC TCCTACCCGA CCAAGTGAAG CACCTGGTCC AACTCCGCAT GGAACGACAG
CGCGCCCTGC GTCGGGAGAG CGAACCCCTG CACCTGTGGT CGATAGTGGA GGAGTACGCG
CTCCGCCGCG TCATCGGGGA CAGACAGACA CGCGACGACC AGCTGCGCCA CCTGCTCACG
ATGGGCCAGA AGCCGAACAT CAACGTCCAG GTCATCCCCG AATCGGCGGG CGCCCACGCG
GGACTGGACG GAGCCTTCGC CATCCTCGAC GCCGGGGTCC ACCTGCCACC CGTGGTCTAC
ATCGACAGCC GAGGAATGAA CACCTACGTC GAGGGCGTCA CCGACCTGGC GGCCTACAAG
GCAACCTACG ACCAGATCCA GTCCGCCGCG CTCTCCCCGG TACAGTCGGC CTCAATGATC
ACGGCGGTTC TGGAGGAGTC ACGATGA
|
|---|
| Protein sequence | MPQEQHGPIA SRLLLGKALQ QLRNEVGMSG AEVAKEMGFG AAKLSKIERG QAPITKADLH
LFFEVLKVSE DVRPTLLELG AQSRRPRRNR TNTFEQELPG KNFERYLGLE EIAVGIKDWH
PYLIPGLLQT PEYAHALISA NPLLLPDQVK HLVQLRMERQ RALRRESEPL HLWSIVEEYA
LRRVIGDRQT RDDQLRHLLT MGQKPNINVQ VIPESAGAHA GLDGAFAILD AGVHLPPVVY
IDSRGMNTYV EGVTDLAAYK ATYDQIQSAA LSPVQSASMI TAVLEESR
|
|---|
| |