9 homologs were found in PanDaTox collection
for query gene Ndas_3756 on replicon NC_014210
Organism: Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_014210  Ndas_3756  putative transcriptional regulator, MerR family  100 
 
 
136 aa  261  3e-69  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  0.417918  normal 
 
 
-
 
NC_013595  Sros_1391  putative transcriptional regulator, MerR family  58.77 
 
 
134 aa  112  1.0000000000000001e-24  Streptosporangium roseum DSM 43021  Bacteria  normal  normal  0.345366 
 
 
-
 
NC_013510  Tcur_4057  transcriptional regulator, MerR family  63.96 
 
 
111 aa  112  2.0000000000000002e-24  Thermomonospora curvata DSM 43183  Bacteria  normal  n/a   
 
 
-
 
NC_014165  Tbis_0762  MerR family transcriptional regulator  59.46 
 
 
110 aa  105  1e-22  Thermobispora bispora DSM 43833  Bacteria  normal  0.358018  normal  0.111351 
 
 
-
 
NC_011992  Dtpsy_0035  transcriptional regulator, MerR family  44.23 
 
 
167 aa  45.1  0.0003  Acidovorax ebreus TPSY  Bacteria  normal  0.987448  n/a   
 
 
-
 
NC_008782  Ajs_0017  MerR family transcriptional regulator  44.23 
 
 
167 aa  45.1  0.0004  Acidovorax sp. JS42  Bacteria  normal  normal  0.801756 
 
 
-
 
NC_008752  Aave_0032  MerR family transcriptional regulator  42.31 
 
 
134 aa  42  0.003  Acidovorax citrulli AAC00-1  Bacteria  normal  normal 
 
 
-
 
NC_007948  Bpro_4873  MerR family transcriptional regulator  38.18 
 
 
141 aa  40.8  0.006  Polaromonas sp. JS666  Bacteria  normal  normal  0.825064 
 
 
-
 
NC_012856  Rpic12D_3216  transcriptional regulator, MerR family  51.43 
 
 
155 aa  40.8  0.006  Ralstonia pickettii 12D  Bacteria  normal  normal 
 
 
-
 
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