Gene Ajs_0017 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAjs_0017 
Symbol 
ID4673761 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidovorax sp. JS42 
KingdomBacteria 
Replicon accessionNC_008782 
Strand
Start bp18538 
End bp19041 
Gene Length504 bp 
Protein Length167 aa 
Translation table11 
GC content72% 
IMG OID639837150 
ProductMerR family transcriptional regulator 
Protein accessionYP_984349 
Protein GI121592453 
COG category[K] Transcription 
COG ID[COG0789] Predicted transcriptional regulators 
TIGRFAM ID[TIGR02044] Cu(I)-responsive transcriptional regulator 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value0.801756 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCACCG CGCCGCGGCG CCCCGCCCAC CGCGTGCCCA GCGACGGCGC CGGGCCCGCG 
GCCGCGCTGG ACTGGCCCGT GGCCATCGGC ACCGCCGCCG AGCGCGCAGG CGTCTCGGCG
CGCATGCTGC GCCACTACGA ATCACTGGGC CTGCTGACCG GCGTGGCGCG CACCGACAGC
GGCTACCGCC AGTACACCGA GGCCGATGTG CACACCCTGC GCTTCATCCG CCGCGCGCGC
GACCTGGGCT TCTCGATGGA GGAGATCGCC ACCCTGCTCG GCCTGTGGCA GGACAAGCAG
CGCGCCAGCA GCCAGGTCAA ACGCATCGCC CAGGCGCACA TCGACAACCT GAGCGAGCGC
ATCGCCGCCA TGCAGGCCAT GCAGCGCAGC CTGCAGGCGC TGGTGCACTG CTGCCACGGC
GACGACCGGC CGGACTGCCC GATCCTGGAC GATCTGGCCA TGGCCGGCAT CCCGAATAGC
GGCGCCGCCG ACGTCGCTAT TTAA
 
Protein sequence
MSTAPRRPAH RVPSDGAGPA AALDWPVAIG TAAERAGVSA RMLRHYESLG LLTGVARTDS 
GYRQYTEADV HTLRFIRRAR DLGFSMEEIA TLLGLWQDKQ RASSQVKRIA QAHIDNLSER
IAAMQAMQRS LQALVHCCHG DDRPDCPILD DLAMAGIPNS GAADVAI