Gene Ndas_3507 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNdas_3507 
Symbol 
ID9247376 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNocardiopsis dassonvillei subsp. dassonvillei DSM 43111 
KingdomBacteria 
Replicon accessionNC_014210 
Strand
Start bp4210908 
End bp4213343 
Gene Length2436 bp 
Protein Length811 aa 
Translation table11 
GC content74% 
IMG OID 
Productalpha-1,2-mannosidase 
Protein accessionYP_003681414 
Protein GI297562440 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.333172 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCCTCC CTCCACGCTC CCCCCGACTC CTACCCCCGC TGCTCGCCCT CGCCGTCGGC 
GCCGCCCTGC TCTCCCCCGC ACCGGCGGCC TCCGCGTCGC CGCTCCCGGC CGAGACGGCC
CAGGCCGTGG CCTCGCCCGT CGACCACGTG GACCCGTTCA TCGGCTCCAC GAACGGCGGC
AACACCTACC CCGGCGCGGT CCGGCCGTTC GGGATGATCT CCTGGAGCCC GACCACCACC
CGCGGGGACC AGACCGACAC CGGCGCGGCC AACGGCTACT CCTACGACGT CACGCGGGTG
CGGGGCTTCG CCCTGACCCA CGTCAACGGC GCCGGGTGCC ACCCCGGTGC CGCCGGTGAC
GTGCCGATCA TGCCGGTCAC CGTGCCCGTG GAGAGTTCGC CCAGCGCCGA CACCCGCGAC
GAGGTGTACG CGAGCGACTT CGACCACGCC GACGAGTCCG CCTCCCCCGG CCGCTACACG
GTGACCCTGG AGAACGGGGT GCGCACGGAC CTGAGCGTCA CCGACCGGGC CGGTGCCGGG
GAGTTCGACT TCCCCTCGGA CACCCCCGCC AGCCTGCTCT TCCGCACCTC CAACTCGCTC
AACGGCAGCG AGGACGCCGA CGTCCGCATC GACGCGGAGG CCCGCACGGT GAGCGGTTCG
GTGCTCACCG GCGCCTTCTG CGGACAGCGC GCCAACGGCG GCGAGAACAA CCGGAACTCC
TACTACCGGC TGCACTTCAC CGCGCACTTC GACACCCCCT TCACCGAGGT GGGCACGTGG
GAGGACGGCG AGCTGAAGCC GGGGGCCACC ACCGCCTCCG GGGGTGAGGG CTACGTCCGC
GACCAGCGGC GGGGCCGGGG CTCGGGCGGC TACGTCTCCT TCCCCGAGGG CTCCGACGTC
GGCGTGCGCG TGGGCATCTC CTACGTCAGC GCGGAGAACG CCGAGGCCAA CCTCGCCGCC
GAGATCGCCC CCGGGCAGAG CGTGGACGCG GTGGCCGCGT CGGCGCGCGA GGCCTGGAAC
CGGCGCCTGC GCACGATCAG GGTCGGCGGC GGCACCGGGG ACCAGCGCAC CGCCTTCTAC
ACGGCGCTGT ACCACTCCCT GCTCCAGCCC AACCTGGTGA GCGACGTCGA CGGCCGCTAC
CCGGGCATGG ACGGCGAGGC GCACCGCGTG GCGGACGGAC AGGACGCCCA GTACACGAAC
TTCTCCGGCT GGGACCAGTA CCGCGCGCAG GTCCAGCTGC TCGCGCTGCT GGAGCCCGGG
GTGGCCGGGG ACTTCGCGCA GTCCCTGCTC AACTTCTCCG AGCAGAACGG CGGCGTGTGG
GACCGCTGGG TGCACATCAA CGGGCCCACG CACGTGATGA CCGGCGACCC CTCGGCCGCG
ACGCTGGCGA CGTTCGCCGC GATGGGCGTG GACGGGTTCG ACGCCGAGGC CGCCTACGCG
TCCCTGCGCA CCCAGGCCAC CGAGCCGCAC CCCGACGGCC TGTCCGACGC CGGGTGCCCG
GGCCAGTGCG AGGGCCAGCG CCCGAACCTG GAGCGCTACC TCGAACTCCA CTACGCGCCG
CAGGACGACT GCCACTGCTG GGGCGGGGCA GCGGAGACGC TGGAGGCCTC CGTGGCCGAC
AACGCGCTCG CCCAGTGGGC GGAGCGCCTG GGGCGCGGGG ACGACGCCGC GATGTTCGCC
GAGCGCGGCG GGTACTGGCG CAACGTCTAC AACCCGGAGG CCACGCCGGA GGCGGGCTAC
GCGCAGGCGC GCGACGCCGA CGGGTCCTGG GTGAGCCCCT TCGACCCCGG GCGCGACACC
GGGTTCGCGC AGGGCACGAG CGCGACCTAC ACGTGGATGG TGCCGCACGA CGTCGGCGGC
CTGGCCGAGG CGATGGGCGG CCGGGAGACC GCGGCCGAGC GCCTCGACGG GTTCTTCCGT
ACCCCCGACG GCGCGTGGTC GGTGGGCGGC GGCGACCCGC TGCGCTACGA CCCCACCAAC
GAGCCGGGCA TCCACGCCCC GTGGATGTAC AACGCGCTCG GGCAGCCGTG GAAGACCCAG
GAGACGGTGC GCGAGATCGT GGACACCCAG TACGGGACGG GGCCGGGCGG CCTGCCCGGC
AACGACGACC TGGGCACGAT GTCGGCCTGG TACGTGTTCT CGGCTTTGGG CCTGTTCCCG
CAGGCGCCGG GGCGCGGCGA GCTGCTGCTG TCGGCTCCGG TGTTCTCCTA CGCCAGGATC
GCGCCGGGCG GGCGCGAGCC GATCACCGTC GTCGCCCCGA ACGCCGGGCC GGACACGCCC
TACATCGGTT CGGTGCGCCT GGACGGGCGG GAGCACACGC GCTCCTGGCT GCCGGAGTCC
TTCCTCGGCG GGGGCGGGCG CGTCACGCAC GTGCTGGTCA GTGAGCCCAA CACCGCGTGG
GCGACCGCTC CGGAGGACCT GCCCGTCGAC CACTGA
 
Protein sequence
MTLPPRSPRL LPPLLALAVG AALLSPAPAA SASPLPAETA QAVASPVDHV DPFIGSTNGG 
NTYPGAVRPF GMISWSPTTT RGDQTDTGAA NGYSYDVTRV RGFALTHVNG AGCHPGAAGD
VPIMPVTVPV ESSPSADTRD EVYASDFDHA DESASPGRYT VTLENGVRTD LSVTDRAGAG
EFDFPSDTPA SLLFRTSNSL NGSEDADVRI DAEARTVSGS VLTGAFCGQR ANGGENNRNS
YYRLHFTAHF DTPFTEVGTW EDGELKPGAT TASGGEGYVR DQRRGRGSGG YVSFPEGSDV
GVRVGISYVS AENAEANLAA EIAPGQSVDA VAASAREAWN RRLRTIRVGG GTGDQRTAFY
TALYHSLLQP NLVSDVDGRY PGMDGEAHRV ADGQDAQYTN FSGWDQYRAQ VQLLALLEPG
VAGDFAQSLL NFSEQNGGVW DRWVHINGPT HVMTGDPSAA TLATFAAMGV DGFDAEAAYA
SLRTQATEPH PDGLSDAGCP GQCEGQRPNL ERYLELHYAP QDDCHCWGGA AETLEASVAD
NALAQWAERL GRGDDAAMFA ERGGYWRNVY NPEATPEAGY AQARDADGSW VSPFDPGRDT
GFAQGTSATY TWMVPHDVGG LAEAMGGRET AAERLDGFFR TPDGAWSVGG GDPLRYDPTN
EPGIHAPWMY NALGQPWKTQ ETVREIVDTQ YGTGPGGLPG NDDLGTMSAW YVFSALGLFP
QAPGRGELLL SAPVFSYARI APGGREPITV VAPNAGPDTP YIGSVRLDGR EHTRSWLPES
FLGGGGRVTH VLVSEPNTAW ATAPEDLPVD H