Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ndas_3237 |
Symbol | |
ID | 9247094 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111 |
Kingdom | Bacteria |
Replicon accession | NC_014210 |
Strand | - |
Start bp | 3869261 |
End bp | 3870847 |
Gene Length | 1587 bp |
Protein Length | 528 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | |
Product | inner-membrane translocator |
Protein accession | YP_003681149 |
Protein GI | 297562175 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.941278 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 26 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGTAGGA TCCCCCGTCC CGCGAGGACC CTGCCCGCAC CCGCGGCCGC GGGCGTCGCG ATCGCCCTGG GCGTGGTGCT GACCATCGCC CTGGACACGG CGCTGCTGTG GTGGGCGGCG CTGATCATCG GCGTCGTCGC GGCCTTCGCC TTCGTGGCCT GGTCCGGGCC CATGGTGCCG CGCGAGCGCC GCGCGGGCGC GGACGGCGCC CGCGAGGAGG GCACGGTCCT GCACAACACG CTGGTGGTGC CCACCGCCCT CGTGCTGTCG GTGGCCGCCG GTCTGCTGAC CGCGTGGTTC CTGGACCTGT CCCTGATCGA GCCGGTGGCC GCCGCGCTGG GCGCGCTGGC CGGCTCCGCC GCGGCCTTCT GGCTGTTCCA CCGGCTGTCG GCCATGCTGG CGCTGTCCTT CGCCGCGGTC CTGGCCGCCG GGGTCATCGC GACCGCGGTC ACCGCGGCCG TGCTGTTCTT CAGCGGCATC CCGCCGCTGG CCACGTTCGA GCGGATGCTG GAGTACGGCA CCCGGCCCGA CAGCCTGGTG CGCATCGTCA ACGACGGCAC CACGTACTAC CTGGCCGCGG TCGCGGTGGC GATCGGCTTC AAGATGAAGC TGTTCAACAT CGGCGTGGAC GGCCAGTACC GGCTCGCCGC GCTGCTGTCG GCCGCCGTGG GCGGTTACAT CATGCTGCCG CCGGTACTCA GCCAGATCGT CATCGTCATC ACGGCCGTGG CCGTGGGCGG CGTGTGGGCG GGCATCGCCG GGTACCTCAA GGTGACCCGC GGCGTGTCCG AGGTGATCTC CACGATCATG CTCAACTCCA TCGCCACCGG TGTCACCGCC TACCTGCTGA GCACCGACCG CCTCGCGGTG GAGATCAGCA CCAACAACAT CGGCACCCCG CCGATGCCCG AGTCCTCCTG GGTGCCCGGC ATCCCGGCGG GCTTCCTCGG CTCGGACGAG ACGATCTTCG GGTTCGTGCT CCTGGCCGTG GCCGTCGGCA TCGGCTACTG GGTGATGCTC AACCGCACCC GCTTCGGCTT CGAACTGCGG GCCACCGGCC AGTCGCAGAC CGCGGCCGAG GCCAGCGGCG TCAACGTCAA GAAGATGGTG TTCCTGTCCA TGCTCTTCTC GGGCATGGTC GCCGGTCTGG TGGGCCTGCC CCAGTTGCTG GGCAGCTCGC ACCACTACGC CCTGGACTTC CCGACCGGCA TCGGCTTCAT CGGCATCGCC ATCGCGCTGC TGGGTCGCAA CCACCCCGTG GGCATCGTCT TCGCCGCCCT GTTCTGGGCC TTCCTGAACC AGGCGTCGGG CATCCTGCCC TTCGACGGCA TCCCGCAGGA GATCGCGGTC ATCTCGCAGG CCACCATCGT CCTCACCGTG GTCGTGGTCT ACGAGGTCGT GCACCGCTGG GGCCGCCGCT ACCAGCAGCA GCAGATCGGC AGGCAGCTCG GCACCACCGC CGAGTCGCCC GCCCCGGAGA CGGTGAAGGT GTCCGCGGAC GAGACGTCCC CGGCCCCCGC GGACGGTTCC ACCGACGCGG GCACCGCCCC CGAACCCGAG GACAGGCGCG GAGGGGAGGC CAAGTGA
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Protein sequence | MSRIPRPART LPAPAAAGVA IALGVVLTIA LDTALLWWAA LIIGVVAAFA FVAWSGPMVP RERRAGADGA REEGTVLHNT LVVPTALVLS VAAGLLTAWF LDLSLIEPVA AALGALAGSA AAFWLFHRLS AMLALSFAAV LAAGVIATAV TAAVLFFSGI PPLATFERML EYGTRPDSLV RIVNDGTTYY LAAVAVAIGF KMKLFNIGVD GQYRLAALLS AAVGGYIMLP PVLSQIVIVI TAVAVGGVWA GIAGYLKVTR GVSEVISTIM LNSIATGVTA YLLSTDRLAV EISTNNIGTP PMPESSWVPG IPAGFLGSDE TIFGFVLLAV AVGIGYWVML NRTRFGFELR ATGQSQTAAE ASGVNVKKMV FLSMLFSGMV AGLVGLPQLL GSSHHYALDF PTGIGFIGIA IALLGRNHPV GIVFAALFWA FLNQASGILP FDGIPQEIAV ISQATIVLTV VVVYEVVHRW GRRYQQQQIG RQLGTTAESP APETVKVSAD ETSPAPADGS TDAGTAPEPE DRRGGEAK
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