Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ndas_2769 |
Symbol | |
ID | 9246620 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111 |
Kingdom | Bacteria |
Replicon accession | NC_014210 |
Strand | - |
Start bp | 3312170 |
End bp | 3312985 |
Gene Length | 816 bp |
Protein Length | 271 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | |
Product | transcriptional regulator, XRE family |
Protein accession | YP_003680688 |
Protein GI | 297561714 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.310894 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGACGAAGC GACCCACTGA CCCCGCGTGG AAGCACTTCG GGAAGCAGAT GCGGAAACAC CGCGATGCCC TTGGTCTGCT GCAAGTCGAC ATCGCCAAGG TGCTCGGCGT CGTCGGAAGC TGTTACTCCT CATGGGAGAC CGGCGCCCGG AAGGTCGATG AGAAGTACGT CAACAAGCTG GACGAAGCTC TGAAAGCCGG AGGGAGCATC GCTGAGGAGT GGGAGAAAGC CAGCCGTCAG GTGCGTACTG CGTTCAGGTT CGCGGAACTT CCGGAGCTGG AAGGCGCGGC CACGCAGATC CGCGACTTCC AAACGTTAGT GTTCCCGGGC CTGGTTCAGA CACCGGAGTA CGCTCGCGCG ATCTTCGAGG ATGGTTACCC CGGGATGCCA TCGGCCTCCA TCGAAGAACT CGTTCAGGCT CGAATCTCTC GGCAGCGCAT CCTGGAGGAG GAAACCCGGC CGCTGGTGCT TTTCCTCATC GCTGAGTCGG TGTTCTATCA GCAAGTCGGG AACCGTGGTC CTGACCTGCT GCATGAGCAG GTGCAGCGTG TCCTCCGTGA GGTGGAGGGC GGTAGGGTGC GTGTGCAGAT CGTCCCCCGG GACACCAAGA GGCACTACGG AAGCGGGGGG CCTTTCCGGC TGTACACCTT CGCAGACGAA CCCTCTGTGG CTTCTGCTGA GTACATGACT GGGGAGACTG TGATCAGCGA TAAGAACCTG TATCAGGAGT GCGTGACAAC TTTCGGGCTT CTCCAGGGTG AGGCACACTC GGAGTCGACG TCACTTCAGA TGGTGCGAGA GATGGTTGAG CGATGA
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Protein sequence | MTKRPTDPAW KHFGKQMRKH RDALGLLQVD IAKVLGVVGS CYSSWETGAR KVDEKYVNKL DEALKAGGSI AEEWEKASRQ VRTAFRFAEL PELEGAATQI RDFQTLVFPG LVQTPEYARA IFEDGYPGMP SASIEELVQA RISRQRILEE ETRPLVLFLI AESVFYQQVG NRGPDLLHEQ VQRVLREVEG GRVRVQIVPR DTKRHYGSGG PFRLYTFADE PSVASAEYMT GETVISDKNL YQECVTTFGL LQGEAHSEST SLQMVREMVE R
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