| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ndas_2332 |
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| Symbol | |
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| ID | 9246182 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_014210 |
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| Strand | - |
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| Start bp | 2782216 |
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| End bp | 2783466 |
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| Gene Length | 1251 bp |
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| Protein Length | 416 aa |
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| Translation table | 11 |
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| GC content | 77% |
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| IMG OID | |
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| Product | type III effector Hrp-dependent outers |
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| Protein accession | YP_003680260 |
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| Protein GI | 297561286 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 0.411817 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCGACCC TCGGCGTGAT CGCCGACGAC CTCACCGGAG CGACCGACGT CGCGATCGCC
CTCACCGCGT CCGGCCACCG GACCACGGTG GTCCTGGACT CGCGGGACCC CGGCGGCGCC
GACCCCGTCG CCGCCGCGGC GGAGGGGGCC GACGCCGTCG TCGTGGCCCT GAAGTCGCGC
ACCACGCCCG CCGACGCGGC GGTCGCGGCC TCGCTGGACG CCCTCGACCG GCTGCGGAGC
GCGGGGTGCG AGCGGTTCTA CCTCAAGTAC TGCTCCACCT TCGACTCCAC CCCGGACGGC
AACATCGGCC CGGTCGCGGA GGCGGTGCTC GACGCCCTCG GCGAGGACGT CACGGTCGTC
GCACCGGCCT TCCCCGCCAA CGGGCGCACC GTCTACCGCG GCCACCTCTT CGTGGGGGAC
GACCCCCTCG ACGAGTCCCC GATGCGCCAC CACCCGCTCA CGCCCATGAC CGACTCCAGC
CTCCCGCGCC TGCTCGCCCC CCAGGTCAGC GGCGGCGGGG ACGCCATCGC GCTGGTGCCC
TGGCCGGTGG TCGCCCGGGG GGCCGAGGCG GTGCGCGACG CCATCGCGCG GGCCGGTGCG
CAGGGGGCCC GGTTCGTGGT CGTGGACGCC CTGACCGACG CCGACCTGCG CACGCTCGCC
GACGCGACGC GGGACCTGCG CCTGCTGACC GGCGGCAGCG CCCTCGCCCA GGGGCTCACC
GGCCCCCACG GGACCGGCCG CCTGCCGCTC ACCCCGCCCC GGGGGCCGCG CGTCGTCCTC
TCGGGCAGCG CCTCGCGGGC GACCCAGGGC CAGGTGCGCC ACGCCCTCGC CCACGGCGGG
GGACACCACC TGCTCCCCTC CGACCTGCGC CGGGACTTCG GGGCGACGGT GTCGCTGGCC
GTGGAGCGCG CCCTGGAGGG CGGCGCGTCC CCGTTCGTGG TGTACGCGAC CGCCGCACCC
GAACACGTCG TGGACACCGC CGACGCGCCG CTCATCGAGG AGGCTCTGGC CGAGATCGCC
GCACGCCTGG TCGCCGCGGG GGCGCGCGCG CTCCTGGTCG CGGGCGGCGA GACGAGCGGA
GCCGTCGTGC GGCGCCTGGG CGTGGCGTCG CTGGCGCTGG GACCCGAGAT CGACCCGGGC
GTCGCGTGGA CGCTCGGACA CAGCGACGGT GAGGACGTCC AGCTCATGCT CAAGTCCGGC
AACTTCGGCC GCGAGGACCT GTTCGTCCGC GCCTGGGAGG GGGACAAGTG A
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| Protein sequence | MATLGVIADD LTGATDVAIA LTASGHRTTV VLDSRDPGGA DPVAAAAEGA DAVVVALKSR
TTPADAAVAA SLDALDRLRS AGCERFYLKY CSTFDSTPDG NIGPVAEAVL DALGEDVTVV
APAFPANGRT VYRGHLFVGD DPLDESPMRH HPLTPMTDSS LPRLLAPQVS GGGDAIALVP
WPVVARGAEA VRDAIARAGA QGARFVVVDA LTDADLRTLA DATRDLRLLT GGSALAQGLT
GPHGTGRLPL TPPRGPRVVL SGSASRATQG QVRHALAHGG GHHLLPSDLR RDFGATVSLA
VERALEGGAS PFVVYATAAP EHVVDTADAP LIEEALAEIA ARLVAAGARA LLVAGGETSG
AVVRRLGVAS LALGPEIDPG VAWTLGHSDG EDVQLMLKSG NFGREDLFVR AWEGDK
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