Gene Ndas_2011 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNdas_2011 
Symbol 
ID9245861 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNocardiopsis dassonvillei subsp. dassonvillei DSM 43111 
KingdomBacteria 
Replicon accessionNC_014210 
Strand
Start bp2431701 
End bp2432555 
Gene Length855 bp 
Protein Length284 aa 
Translation table11 
GC content77% 
IMG OID 
Productprotein of unknown function DUF6 transmembrane 
Protein accessionYP_003679943 
Protein GI297560969 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.87899 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCTCGGCG CGACACTGTG CGCCGCGCTC GGCGTCCTCG GGTTCTCGTT CACCCTTCCG 
GCCACCGCGT GGGCCCTGGA GGGCTTCGGT CCCTGGAGCG TGGCGGTGGT CCGGTGCGCG
CTGGCCGCCG CGCTGGCGGG CTGCTGTCTC GCGGCGGTCC GCGCCCCGTT GCCCGACCGC
GCCCACCGGC CGGGCATCGC CGTGGTCGCC CTGGGCTGCG TGGCGGCGTT CCCGCTGTTC
AGCACGCTCG CCCTCCAGGT GTCCTCCACC TCCCACGCCG CGGTCGTGAT CGGGCTGCTG
CCGATCACCA CCGCCGTGTT CGCCCTGCGC CGCGGCCCGG CGCGCCCCTC GCGCCGGTTC
TGGGCGGCCG CGGTGTGCGG CGCCGCGGCC GTCGTCGCGT TCGCGCTGGT GCGCGGCGGC
GGAACACCCG GCCCGGCCGA CCTGTACCTC CTGGCGGCCC TGGTGCTGTG CGCCGCCGGG
TACGCCGAGG GCGGTCGGCT GGCCGCGAGC ATGCCGGGCT GGCAGGTGAT CGCCTGGGCG
CTGGTCGCCG CCGCGCCGCT GACCGTGCCC GCCGCTCTGT GGGCGCTGGC CGCCGAGCCG
GTGGACGCCG CGCCGCGCGC GCTCGCGGGC ATGGCCTACC TCGCCGCGGT GTCGCAGTTC
GGCGCGTTCG TGGTCTGGTA CCGGGGGATG GGTGCGATGG GGGTCGCCCG GGCCAGCCAG
CTCCAGCTCG CCCAACCGTT GTTGACCCTG GTGTGGGCGG TGCTGCTGGT GGGAGAGCCG
CTGACCCCGG CCGCGCCCGC CACGGCCGTC GTCGTCCTCG TGTGCATCGC CGTCACCCAG
AGATCGCGCG GCTGA
 
Protein sequence
MLGATLCAAL GVLGFSFTLP ATAWALEGFG PWSVAVVRCA LAAALAGCCL AAVRAPLPDR 
AHRPGIAVVA LGCVAAFPLF STLALQVSST SHAAVVIGLL PITTAVFALR RGPARPSRRF
WAAAVCGAAA VVAFALVRGG GTPGPADLYL LAALVLCAAG YAEGGRLAAS MPGWQVIAWA
LVAAAPLTVP AALWALAAEP VDAAPRALAG MAYLAAVSQF GAFVVWYRGM GAMGVARASQ
LQLAQPLLTL VWAVLLVGEP LTPAAPATAV VVLVCIAVTQ RSRG