Gene Ndas_1919 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNdas_1919 
Symbol 
ID9245769 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNocardiopsis dassonvillei subsp. dassonvillei DSM 43111 
KingdomBacteria 
Replicon accessionNC_014210 
Strand+ 
Start bp2339108 
End bp2339701 
Gene Length594 bp 
Protein Length197 aa 
Translation table11 
GC content75% 
IMG OID 
Productregulatory protein TetR 
Protein accessionYP_003679852 
Protein GI297560878 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.543101 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.413258 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGGGTG CGGCGTCTTC GGGGCCCCGC CTGCGGGCCG ACGCCAAGCG CAACGCCGAG 
CAGATCCGGC GCGCCGCGAT CGACGTCTTC CGGGGGCGGG GCCTGACCGT GCCGCTGGAG 
GAGGTCGCCC GGGCGGCCGG GGTGAGCAAG GCCACGATCT TCAACCGGTT CGGCGGCAGG 
GTCGGCCTCA TCGAGGCCGT CGTCGAGGAG GTGGTCGCGG CCGAGCTGTA CGCCGCCATC 
GACCGCACCC GGGCCCTGGA CGACGCCGGG GAGCGGATCG CCCACTACGT CACCGCGATG 
CGCGACCTCC TGTACCGCCA GCCCGCCGCG ATCGACCTCC TGTTGCAGGC GTATCCGCAC 
TCGCGGCGGC TCCTGGAGAT CTGCCGGGCC GCGGGGGAGA TCAACGACGA GCTGGTCGCG 
GCGGGCAGGG CCTGCGGCGC GCTGCGTCCC GCGTTCGAGG CGGACGACCT CCACGCGCTC 
GTCGTGGACA CCGCGCTCGC CCTCAAGCAC GGGACCCGCC CGCCGCGGGA GGACTACGAC 
CGCCGCACCG CCTTCCTCCT CGACGGGATC CGCGGGCGCC GGGAGTCCGA CTGA
 
Protein sequence
MTGAASSGPR LRADAKRNAE QIRRAAIDVF RGRGLTVPLE EVARAAGVSK ATIFNRFGGR 
VGLIEAVVEE VVAAELYAAI DRTRALDDAG ERIAHYVTAM RDLLYRQPAA IDLLLQAYPH 
SRRLLEICRA AGEINDELVA AGRACGALRP AFEADDLHAL VVDTALALKH GTRPPREDYD 
RRTAFLLDGI RGRRESD