Gene Ndas_1865 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNdas_1865 
Symbol 
ID9245715 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNocardiopsis dassonvillei subsp. dassonvillei DSM 43111 
KingdomBacteria 
Replicon accessionNC_014210 
Strand
Start bp2277068 
End bp2277601 
Gene Length534 bp 
Protein Length177 aa 
Translation table11 
GC content71% 
IMG OID 
Producttranscriptional regulator, MarR family 
Protein accessionYP_003679799 
Protein GI297560825 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.281666 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value0.52003 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGACCCACG ACACCGCCCC CGAACTCACC TTCTGGTCCT TCGTGGACTA CGCGGTGCGG 
AAGGCCGAGC AGGAACTGCC CTCCGTGAAC GCCGACGCCA TGCGGATGGT CCTGACCCTC
AACCGGGCGA CGAGCATGGT CGTCTACGAC CTGGAGTCGT CCGTGCACCG CCCGCGCGGT
CTCACCTGGC CCGGGTTCCG GGTGATCTTC GCGCTGTGGC TGGCCGGGCC CATGGAGGCC
AAGACCACCG CCGAGATCTC GGGGATGAGC CGGGCCGCGT TGTCCGCGCT GCTCAACACC
CTCGAACGCG ACGGGCTCAT CGTGCGCGAG CGCGCCGCCC ACGACCGGCG CGCCCTCCAG
CTCAGCCTCA CCGAGGCCGG GTACCGGGCG ATCCTCGGCG GCTTCCGGGC GCACAACCGG
CGCGAGAGCG CCTGGGCCGA AGCGCTGGAA CCCGACGAGC GCCGGGAACT CGTGCGCCTG
CTCAACAAGC TCATGGCGGG CTCCACCGAG GCCAAGGCCA AGTTCCGCAA CTGA
 
Protein sequence
MTHDTAPELT FWSFVDYAVR KAEQELPSVN ADAMRMVLTL NRATSMVVYD LESSVHRPRG 
LTWPGFRVIF ALWLAGPMEA KTTAEISGMS RAALSALLNT LERDGLIVRE RAAHDRRALQ
LSLTEAGYRA ILGGFRAHNR RESAWAEALE PDERRELVRL LNKLMAGSTE AKAKFRN