Gene Ndas_1450 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNdas_1450 
Symbol 
ID9245300 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNocardiopsis dassonvillei subsp. dassonvillei DSM 43111 
KingdomBacteria 
Replicon accessionNC_014210 
Strand
Start bp1775053 
End bp1775577 
Gene Length525 bp 
Protein Length174 aa 
Translation table11 
GC content73% 
IMG OID 
Productputative signal transduction protein with EFhand domain 
Protein accessionYP_003679388 
Protein GI297560414 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.755568 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.113909 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGACGACCG CCACCAAGAC CACCAGCCGC CTTGAGGAGC GTTTCCGCCT CTGGGACGTC 
GACGGCAACG GGGTGATCGA GCGCTCGGAC CTCGCGGCCG AGGCCGACGG CATCATCTCG
CGGCTCGGCG CCGAGGGCAC CCCCCGGGGC GACGCGCTCA AGGCCGCCTA CCTGGGCATG
TTCGACCGCC TGGCGGCGGC CGCGGGCACC GACCGGATGG ACCGCGACCA GTTCATGGAG
GTCGCCGGGC GCGAGATGGT CGGCAGCGAG GACGGCTTCG CCGAGGTCGC CCGGCCCACG
CTCCAGGCCA CCATGGACGT GCTCGACACC GACGGCGACG GCGAGATCAG CCGGAGCGAG
ATGCGCCGGT GGCTCGACGC CGTCGGCGTC AGCGCGCGGG ACTCCGACCG CGTCTTCGAC
GAACTCGACA CCGACGGCAG CGGCACGCTC TCCGCCTCCG AGCTGGTCGA CGCGGTCCGC
GACTACCACC TCGGCCGCAA CGACATCCCC CTCCTCGGCG GCTGA
 
Protein sequence
MTTATKTTSR LEERFRLWDV DGNGVIERSD LAAEADGIIS RLGAEGTPRG DALKAAYLGM 
FDRLAAAAGT DRMDRDQFME VAGREMVGSE DGFAEVARPT LQATMDVLDT DGDGEISRSE
MRRWLDAVGV SARDSDRVFD ELDTDGSGTL SASELVDAVR DYHLGRNDIP LLGG