Gene Ndas_1181 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNdas_1181 
Symbol 
ID9245031 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNocardiopsis dassonvillei subsp. dassonvillei DSM 43111 
KingdomBacteria 
Replicon accessionNC_014210 
Strand
Start bp1436836 
End bp1437414 
Gene Length579 bp 
Protein Length192 aa 
Translation table11 
GC content73% 
IMG OID 
ProductCupin 2 conserved barrel domain protein 
Protein accessionYP_003679128 
Protein GI297560154 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.229288 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCGTGC CCGAGGAACT GCTCACCACG CCCGCGCCCG AGCCGGGGGT CGTGTTCCGC 
GCCCGCGGCG AGGGCACGAC CGTGTGGCTC AACGGCGACG TGTACACGGT CAAGGCCTCG
GGGGACGAGT CGCGGGGCGC GATGACGCTC ATCGAGGCGT CCGTCCCGCC GGGGGGCGGG
CCGCCGCTGC ACACGCACGA CGTCGAGGAC GAGGCGTTCT ACGTCCTGGA CGGGGAGCTG
GAGATCTACG CCGGTGAGCG CACCTTCCGT GCCCGGGCCG GGGACTACGT GTTCATCCCG
CACGGGACCG TCCACGGGTT CCGCAACACC GGCACGCACC CGGCTCGCCA GCTACTGATC
TTCACCCCCG GGGGCTACGA GCGCTTCTTC CTGGAGGCGG GCTCCCCGGT CGTGGCCGCG
CGCCCGGCGC CGCCCCGCGA CCCGGCCGAC GACGGCAGGA TCAACGACGT CGGCGAGAAG
TACGGGTCCA TCCAGATCCA GTTCACACGG GGGGAGGCCG CCGACACGCG CGCCGACCTC
ACCCACCACA CCGGCACGGA GCGGGAGAGC AGGGTATGA
 
Protein sequence
MSVPEELLTT PAPEPGVVFR ARGEGTTVWL NGDVYTVKAS GDESRGAMTL IEASVPPGGG 
PPLHTHDVED EAFYVLDGEL EIYAGERTFR ARAGDYVFIP HGTVHGFRNT GTHPARQLLI
FTPGGYERFF LEAGSPVVAA RPAPPRDPAD DGRINDVGEK YGSIQIQFTR GEAADTRADL
THHTGTERES RV