Gene Ndas_0540 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNdas_0540 
Symbol 
ID9244381 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNocardiopsis dassonvillei subsp. dassonvillei DSM 43111 
KingdomBacteria 
Replicon accessionNC_014210 
Strand- 
Start bp663713 
End bp664813 
Gene Length1101 bp 
Protein Length366 aa 
Translation table11 
GC content71% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_003678493 
Protein GI297559519 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value1 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGACTGC GACGGATCCT CCCCCACACC GCCCCTCCGT CCCGGCGGCG CGCCCCGGGC 
AGAGGCGACG ACGGACAGGC CAACGTCCTG CTCCTGTTCG GGCTCACCCT GGCCCTGCTC 
TCGCTGACCC TGCTGTTCGT ACGGGTGGGC GCCGCCAACG ACCAGCGCTC GCGGACCCAG 
ACCGCGGCCG ACGCCGCCGC GCTGGCGGCG GTGGGCGCCC TCCAGGACCG GGCAGCGCAG 
GACATCGTCG ACGGCGCGTA CCCCATGCCC TGGTTCGACG AGGAGGCCGC CGAGGCGCGC 
GCCGAGGAGT ACGCGCGCAG CAACGGGGCG GTCCTCACCG ACATCCGCGC CAGCGACAAC 
GTCATGGGAC GCAGCGGGAA CATCGTGCGG GTGGAGGTGC GCGGCGCCGT GTGCCAGCGC 
GAACTGGAGG AGGACGGGTC CCGGCACTGG AACGACGTGG TCTGCGACGG CAGCGAGGAG 
GAGACCAACA CCGTGGTCGG CAACGCCTCG GCCATCGCCA TCGTCCGCAT CCCCCATCAG 
TGCGGGCGCG ACGGGGGCGA GCTGGTCTGC GACGGCGGCA CCGTCGACGA CCTCGCCTCC 
GCCAAACGGC TGATCGACGT GCACCTGGTC GACCAGGAGG GCCGTTACAG CTTCAACCCC 
AACTTCGTCG GAGGGGGCGG GCCCGCCGTG GACTGCGACT CGCTGGGGTC ACTGCACCCC 
ATCATGTGCG CGGCGCACCA GCGCCTCCAG CAGGAGTTCC CGGGCTTCTT CCTCTCCGCG 
GGCGGCCGGC GCAACGAACC TGGCAGCGAC CACGACAGCG GCGAGGCGGT GGACTACATG 
ATGGCGGAAC TGGGCGGCGT CCCCACCCCG CAGATGCACG CCAACGCCAT CACCGTGATC 
GACTGGGTGA TCCAGAACTC CCACCAGCTC GGGGTCAAGG GCATCATCTA CGAGCAGCGC 
ATCTGGAACG CGACCGGCGG GAACCCGGAC CCGGTGGGCC CCTGGGCGAG CGTGAGCCGC 
GCCATGGACG ACAGGGGCAG CAACACCCAG AACCACATCG ACCACATCCA CCTGGCGGCG 
GGCGTCGGTT TGATGCAGTG A
 
Protein sequence
MGLRRILPHT APPSRRRAPG RGDDGQANVL LLFGLTLALL SLTLLFVRVG AANDQRSRTQ 
TAADAAALAA VGALQDRAAQ DIVDGAYPMP WFDEEAAEAR AEEYARSNGA VLTDIRASDN 
VMGRSGNIVR VEVRGAVCQR ELEEDGSRHW NDVVCDGSEE ETNTVVGNAS AIAIVRIPHQ 
CGRDGGELVC DGGTVDDLAS AKRLIDVHLV DQEGRYSFNP NFVGGGGPAV DCDSLGSLHP 
IMCAAHQRLQ QEFPGFFLSA GGRRNEPGSD HDSGEAVDYM MAELGGVPTP QMHANAITVI 
DWVIQNSHQL GVKGIIYEQR IWNATGGNPD PVGPWASVSR AMDDRGSNTQ NHIDHIHLAA 
GVGLMQ