Gene Ndas_0341 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNdas_0341 
Symbol 
ID9244176 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNocardiopsis dassonvillei subsp. dassonvillei DSM 43111 
KingdomBacteria 
Replicon accessionNC_014210 
Strand+ 
Start bp416375 
End bp417580 
Gene Length1206 bp 
Protein Length401 aa 
Translation table11 
GC content73% 
IMG OID 
Productsodium/hydrogen exchanger 
Protein accessionYP_003678295 
Protein GI297559321 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.972997 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.438917 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAAGGCG ACGCCGCGCA GACACTGGGC ATGCTGCTCC TGATCCTCAT GGCGGCCTTC 
CTCGCCCCGC TGGTCACCGA CCGGCTGGCC GCGTTCGTGG TCGTCCCCTC GGTCGTGCTG 
GAGATCGTCT TCGGCATCGT CCTGGGGCCC TCCCTCCTCG GGCTGGTCCG CGAGACCGAG 
ACGGTGGCGA TGCTTGCCGA CCTCGGGCTC GCGCTGCTCA TGTTCATGGC CGGGTACGAG 
GTCGACTTCG CGCGGATCAG GGGCAGGCCG CTGCGACGGG CGGCGCTGGC CTGGCTGTGC 
TCGGTCGCCC TCGGGATGGG GACGGGGTGG GCCCTGTTCG GCGCCTCCCA GACGGCCCTG 
ATCATCGGTC TGGCCCTGAT CACCACCGCG CTGGGCACGG TGCTGCCCAT CCTGCGGGAC 
TCCGGGGGGC TGGAGGGCGC CTTCGGTGCC CGTTTCATGG CGTCCGGGAC GATGGGGGAG 
TTCGGGCCGA TCGTGCTGAT CACCCTGCTG CTCAGCGGTT ACCGCCCGTT GGAGGCGACG 
CTGCTGCTGG TCGGGTTCTT CGTCCTCGCT GGTCTCTCGG CCTGGCGCGC GACCCGTCCG 
CCCTCGGAGC GGCTGACGCG GCTCATCCGG GCCACCCTCG GCTCCAGCAC CCAGGTGGCC 
GTGCGCCTGT GCATCCTGGT GATCGTGCTG TTCGTGTGGC TGGCGGCGAG CCTGCGGCTG 
GACGCGCTGC TGGGCGCCTT CGCGGCGGGG ATCATCGTGC GGCTGATGTT CACCACCCAC 
CATCCGGGCT CGGTCGAGCG GGTGGAGTCG AAGATGGACG CCGTCGGTTT CGGCTTCCTG 
ATACCGGTGT TCTTCGTGGT GACGGGGGTG CGCTTCGACC TGTCGGCCCT GCTGGCCGAC 
CCGGTGGCGC TGCTGCTGGT CCCCCTGCTG CTGGCGGCCT TCCTGGTCGT GCGGGGCGGC 
CCCGAGTACC TGCTGTCGCG GGGCGACGTC CCCGGGCGCC AGCGGCTCCC CCTGGCGCTG 
TTCTCGGCGA CCGCGCTGCC CCTGATCGCG GTCCTGGCGA CGATCGGGAC CGACACGGGC 
GCCCTCGACG GCGCCACCGC CGCCGCGCTT CTGGGCGCGG GCGTGCTGAG CGTGCTCGTC 
CTGCCCCAGG TGGGCGGCGC CCTGCTGCGC CGCTCCCGGA CCGCGGCGGG GGAGGCGGAG 
CGTTAG
 
Protein sequence
MEGDAAQTLG MLLLILMAAF LAPLVTDRLA AFVVVPSVVL EIVFGIVLGP SLLGLVRETE 
TVAMLADLGL ALLMFMAGYE VDFARIRGRP LRRAALAWLC SVALGMGTGW ALFGASQTAL 
IIGLALITTA LGTVLPILRD SGGLEGAFGA RFMASGTMGE FGPIVLITLL LSGYRPLEAT 
LLLVGFFVLA GLSAWRATRP PSERLTRLIR ATLGSSTQVA VRLCILVIVL FVWLAASLRL 
DALLGAFAAG IIVRLMFTTH HPGSVERVES KMDAVGFGFL IPVFFVVTGV RFDLSALLAD 
PVALLLVPLL LAAFLVVRGG PEYLLSRGDV PGRQRLPLAL FSATALPLIA VLATIGTDTG 
ALDGATAAAL LGAGVLSVLV LPQVGGALLR RSRTAAGEAE R