Gene Ndas_0090 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNdas_0090 
Symbol 
ID9243921 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNocardiopsis dassonvillei subsp. dassonvillei DSM 43111 
KingdomBacteria 
Replicon accessionNC_014210 
Strand
Start bp113966 
End bp115399 
Gene Length1434 bp 
Protein Length477 aa 
Translation table11 
GC content75% 
IMG OID 
Productmagnesium protoporphyrin chelatase, putative 
Protein accessionYP_003678047 
Protein GI297559073 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.320912 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAGCGCCC TTCCCGAAGC CCCCTCCCCC GCCCCGCCCC CGCTCCCGCG CACCCGCGCG 
GACCTGCGCG GATCCGGGCA CGTCCACCGA CCGGTCGCCG CCGAGGTGCG GGAGAACCTG
CTGCGGCGGA TGGCCTCGGG ACGGCCCCGG TTCCCCGGGG TGCACGGGTT CGATGCCACC
GTGCTGCCGC AGGTGGAGCG GGCCCTGCTG GCCGGACACG ACATCGTCCT GCTGGGCGAG
CGCGGCCAGG GCAAGACCCG GCTGATCCGC ACCCTGGCGA CCCTGCTGGA CGAGTGGTCC
CCGGCGGTGG CCGGGTGCCC GGTCAACGAC CACCCCTACA CGCCGGTCTG CCCGGCCTGC
GTGCGCCGTT CGGCACGGGA GGGCGACGGC CTGCCGGTCG TGTGGCGGCA CCGCTCGGAG
CGCTACGGCG AGAAGCTGGG CACGCCCGAC ACCGGCGTGG GCGAGCTGAT CGGCGACGTG
GACCCGGCGC TGCTGGCGCG GGGGCGCTCC CTCGGCGATC CCGAGACCAT CCACTACGGT
CTGGTGCCGC GGGCCAACCG GGGCGTGTTC TGCGTCAACG AGCTGCCCGA CCTGCCCGCA
CGGGCCCAGG TGGCGCTGTT CAACGTGCTG GAGGAGCGCG ACCTCCAGGT ACGCGGCTAC
AACCTGCGGC TGCCGCTGGA CCTGCTTCTG GTGGCGAGCG CGAACCCGGA GGACTACACG
AGCCGGGGAC GCATCGTCAC CCCGCTCAAG GACCGCTTCG GCGCGCAGGT GCGCACCCAC
TACCCGCTGA CCCTGGCGGA CGAACTGGCG CTCATCCGGC AGGAGGCGGC GCTGCCCGAG
GGCACGACGG TGCCCTCGCA CCTGCTGGAG GCCGTGGCGC GCTTCACCCG GCTGGTCCGC
GCCTCGAAGA AGGTGGACGC CCGTTCGGGG GTGTCGGTGC GCTTCTCGGT GTCCGCGGCC
GAGACGGTGG CGGCGTCGGC GCTGCGCCGG GCTGCCCTGA CCGGCGGGGA GGTTCCGGTG
GCCCGGGTGT GCGACCTGCC CGCCGCGGTG GAGCCGCTGC TGGGCAAGGT CGAGTTCGAG
ACGGGTTCCG AGGGCCGCGA GGCGGAGATC CTGCACGCGC TGCTGCGCCG GGCGGTGGCG
GAGGTGTTCC GCGAACGCCT GGGAACGGCG GACCTGTCCG AACTCGCCGA CCGCTTCTCG
GGCGGCGGCA CGGTGGAGAC CGGTGACCTG GTGGGCGCCG CCGAACTGCT GCGGCGGGTG
GGCGCGGTCC CGGGACTCGC GGCGATGATC GGGCACGCGG CCCCCGAGGA CGAGGACGGC
CCGCCGACGC CGGGGCTGGC CGCCGCTGTG GTGGAGTTCG CGCTGGAGGG CCTGTACCTG
GAGCGCCGGC TGTCCAAGGA CGCGCTTCCC GACGGAGGGG TCTACCGCTT CTAG
 
Protein sequence
MSALPEAPSP APPPLPRTRA DLRGSGHVHR PVAAEVRENL LRRMASGRPR FPGVHGFDAT 
VLPQVERALL AGHDIVLLGE RGQGKTRLIR TLATLLDEWS PAVAGCPVND HPYTPVCPAC
VRRSAREGDG LPVVWRHRSE RYGEKLGTPD TGVGELIGDV DPALLARGRS LGDPETIHYG
LVPRANRGVF CVNELPDLPA RAQVALFNVL EERDLQVRGY NLRLPLDLLL VASANPEDYT
SRGRIVTPLK DRFGAQVRTH YPLTLADELA LIRQEAALPE GTTVPSHLLE AVARFTRLVR
ASKKVDARSG VSVRFSVSAA ETVAASALRR AALTGGEVPV ARVCDLPAAV EPLLGKVEFE
TGSEGREAEI LHALLRRAVA EVFRERLGTA DLSELADRFS GGGTVETGDL VGAAELLRRV
GAVPGLAAMI GHAAPEDEDG PPTPGLAAAV VEFALEGLYL ERRLSKDALP DGGVYRF