Gene Namu_5365 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNamu_5365 
Symbol 
ID8450998 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNakamurella multipartita DSM 44233 
KingdomBacteria 
Replicon accessionNC_013235 
Strand
Start bp6007016 
End bp6007978 
Gene Length963 bp 
Protein Length320 aa 
Translation table11 
GC content73% 
IMG OID645044396 
ProductUspA domain protein 
Protein accessionYP_003204618 
Protein GI258655462 
COG category[T] Signal transduction mechanisms 
COG ID[COG0589] Universal stress protein UspA and related nucleotide-binding proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones93 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones55 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGATCG TCGTCGGCTT CAGCCCGCAC AAGGGCGGCC GGGACGCCCT GGAACTGGCC 
GTGCTGCTGG CCCGGTCGGG CCGGCCCGAG CCGGTGGTCG TCACCACCGT CACACCCCAG
CACTGGACCA CCCCGTCGAT GGCCAAGGTG GATGCCGAGT TCCAAGCCTG GGCCACCGCC
CAGGGCGAGG CCGCCCTGGA CCAGGCCCGG CAGTTCATGG CGGCCAAGGC GCCGGAGTTG
TCGGTCTCCT ACGGCCAGGT GGCCGGGCGG TCCGTCCCCG CCGCGCTGTC CCGCTCGTGC
GCGGACGCCG AGGGCGACCT GCTGGTGCTG GGCTCCTCCC GGGACGGCCG GTCCGGGCAG
GTCGTGCTGG GGTCGACCTC CGAACCGTTG CTGCATTCCT CGCCGCTGCC GGTGGCCATC
GCGCCCCGCG GGTACCGGGC CCACTGCACC GCGATCAGCC GGATGAGCTG CTCGTACTCG
GGCACCGAGG AGTCCGGCGA TCTGCTGCTG GCGGTGGCCG GGATGAGCCG GCGGATCGGC
GGGGCCCTGC GGGTGGTGAC CTTCGGCGTG CGTGGACGCA CCATGTACCC ACCGGAGGTG
GGGCTGGGCG CCGAGGACAT GGTGCTGAGC CAGTGGACCG AGCAGGTCCG CCAGTTCCAG
CGGGCGGCGC TGGACCGCCT GAGCGAGTTG GCCCTGCTGC CCGCGTCGGC CTCCGCGGAG
ATCGCGACCG GTTCGGACTG GGCCGACGTG ATGGACGAGC TGGAGTGGGA GCCGGGCGAG
GTCCTGGTGG TCGGCTCGTC GCCGCTGGGC ACTCTGGCCC GGGTGTTCGT GGGCTCCCGG
GCGACCAAGA TCATCCGGTA CTCGCCGGTG CCGGTGGTGG TCGTGCCGGC CGCCGTGGCC
AGCAAGGTGG CCGAGGATCT GGACCCGAGC CCGGACCCGA ATCCGCACCC CGACCCGAAC
TGA
 
Protein sequence
MTIVVGFSPH KGGRDALELA VLLARSGRPE PVVVTTVTPQ HWTTPSMAKV DAEFQAWATA 
QGEAALDQAR QFMAAKAPEL SVSYGQVAGR SVPAALSRSC ADAEGDLLVL GSSRDGRSGQ
VVLGSTSEPL LHSSPLPVAI APRGYRAHCT AISRMSCSYS GTEESGDLLL AVAGMSRRIG
GALRVVTFGV RGRTMYPPEV GLGAEDMVLS QWTEQVRQFQ RAALDRLSEL ALLPASASAE
IATGSDWADV MDELEWEPGE VLVVGSSPLG TLARVFVGSR ATKIIRYSPV PVVVVPAAVA
SKVAEDLDPS PDPNPHPDPN