Gene Namu_4954 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNamu_4954 
Symbol 
ID8450585 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNakamurella multipartita DSM 44233 
KingdomBacteria 
Replicon accessionNC_013235 
Strand
Start bp5531785 
End bp5532972 
Gene Length1188 bp 
Protein Length395 aa 
Translation table11 
GC content72% 
IMG OID645043992 
Product6-aminohexanoate-dimer hydrolase 
Protein accessionYP_003204216 
Protein GI258655060 
COG category[V] Defense mechanisms 
COG ID[COG1680] Beta-lactamase class C and other penicillin binding proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones52 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones40 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCATGA TCGGCTTTCC GCCGCGCCCG GCCGACCGTT GGTCGCTCGC CACCTGGCAG 
AACGCGCCCG CCAACCGCTG GTCGTTCCAG CACGTCCGCG AGGTCGTGCC GACCGCCCGG
GTGTCCCGCG GCGGCACGAC GGCCACGCCG CTGCCGATGG CCGGCGGGTT CGACCCCGAG
CAGGCGGTGT GGCGACTCGA GGGCAACTGG TCGACGGTGG CCGACGTCAT CGCCGACACC
TACACCGACG GTTTCCTGGT GCTGCACCGC GGCCAGGTGG TCACCGAGCA GTACCCCGAG
GGCATGCCGG CGGACCGCCC GCACATCCTG ATGTCGGTCT CCAAGTCGGT GGTCGGCGCC
CTGGTCGGCA TCCTGGCCGA CGAGGGCGCG ATCGACGTGC TCACCGCGGT GGACGCGTAC
GTGCCCGAAC TGGCCGGGTC CGGGTACCGC GGGGCCACCG TGCAGGACGT GCTGGACATG
CGCTCGGGGG TGCGGTTCTC CGAGACCTAC CTGGACCCGG CCGCCGAGGT GCGGCTGCTG
GAGCAGGTCA TCGGCTGGGC ACCGCGCACC GATCCGGACC TGCCGACGTC GATGTACGAC
TACCTGGCGA CACTGCGGGC CGATCGCGCG CACGGCACCG CGTTCGAGTA CCGCTCGTGC
GAGACCGACA TCCTGGCCTG GGTGTGCGAG CGGGCCACCG GCAGCCGGCT GACCGAGCTG
CTGTCCTCCC GGATCTGGGC CAAGCTGGGC TGCGAGCAGG ACATGGACGC GGCGGTCGAC
CCGGCCGGCG CGGTGTTCGC CGACGGCGGC CTGTCCGCCA CCCTGCGCGA CCTGGGCCGG
TTCGGTCAGA TGCTGCTGGA CGGCGGGTTC GCGCACGGAC GGCCGGTGGT GCCCGGCTGG
TGGATCACCG ACAGCCTGGC CGGGGCGGCC GACACCCGGG ACACGTTCGC CGCCTCCGGC
AACGGCTCCT GGCTGCCGGG CGGCGGCTAC CGCAACCAGT TCTGGCTACC CGGCGGCCGG
GAGGTGTTGC TGTGCCTGGG CATCCACGGC CAGCTCATCT GGATCGAGCC GGCTCGCGAG
CTCGTCGTGG TCAAGCTGTC GTCCTGGCCG TTGCCGCAGC AGCCGGCCCT GCTGCTGGAC
ACCTTCGCGG CCATCGACAT GATCGGATTC CAGCTCACCC TCGGCTGA
 
Protein sequence
MTMIGFPPRP ADRWSLATWQ NAPANRWSFQ HVREVVPTAR VSRGGTTATP LPMAGGFDPE 
QAVWRLEGNW STVADVIADT YTDGFLVLHR GQVVTEQYPE GMPADRPHIL MSVSKSVVGA
LVGILADEGA IDVLTAVDAY VPELAGSGYR GATVQDVLDM RSGVRFSETY LDPAAEVRLL
EQVIGWAPRT DPDLPTSMYD YLATLRADRA HGTAFEYRSC ETDILAWVCE RATGSRLTEL
LSSRIWAKLG CEQDMDAAVD PAGAVFADGG LSATLRDLGR FGQMLLDGGF AHGRPVVPGW
WITDSLAGAA DTRDTFAASG NGSWLPGGGY RNQFWLPGGR EVLLCLGIHG QLIWIEPARE
LVVVKLSSWP LPQQPALLLD TFAAIDMIGF QLTLG