Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Namu_3966 |
Symbol | |
ID | 8449585 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Nakamurella multipartita DSM 44233 |
Kingdom | Bacteria |
Replicon accession | NC_013235 |
Strand | - |
Start bp | 4376626 |
End bp | 4378668 |
Gene Length | 2043 bp |
Protein Length | 680 aa |
Translation table | 11 |
GC content | 77% |
IMG OID | 645043011 |
Product | PfkB domain protein |
Protein accession | YP_003203247 |
Protein GI | 258654091 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG1482] Phosphomannose isomerase |
TIGRFAM ID | [TIGR00218] mannose-6-phosphate isomerase, class I |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.0173743 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 0.0415319 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGCACACCA TTGCTGTGGC CGGTCACATC TGCGTGGATG TGACGCCCGA GCTGGGCCCC ACCGCTCAGC TCACCCCCGG CCGGCTCATC GAGGTCGGGC CGTTGGCTCT GGAGCTGGGC GGCTGCGTCG CCAATACCGC CCGGGCGCTG GGTGCCCTGG GCGTTCCGGT GCTGGCCAGC GCGCTGACCG GCGACGACGA GCTCGGCCGC TATGCGCAGC GGGCGGTCGC CGAGCTGCCC GGCGTGACCG GCCGGCTGAC CGCCTGCCCG GGTCGCGCCA CCTCCTACAG CCTGGTCCTG GAACCGCCGC GGACCGACCG CACGTTCTGG CACCACACCG GCGTCAACTG CGACTTCACC GGCGCCTCGG TCGATCTCGA TGGCGCCGAC CTGCTGCACG TGGGCTACCC GTCGCTGCTG CCCGGTCTGC TGACCGACGG CGGGACGCCG TTGGTCGAGC TGCTGGGCCG GGCCCGGGCC GCCGGGCTGA CCACCTCGAT CGACCTGGCC GTGGTCGACC CGGACTCGGC CGCCGGCCGG CTGGACTGGG CGGCCATCCT GGCCCGGGTG CTGCCGCTGG TCGACATCGT CAGCCCCAGC GCCGACGACC TGGTGTCCGC CCTCCGGCTG ACCGAACCGG TCACTCCGGC GCTGGTCGAG ACCCTGGCCG ACCGGCTGAT CGGCTGGGGC GCCGCGGTCG TCGCGGTCTC GGCCGGCGCC GGGGGAGTGC GGCTGCGGGC CGGATCGGCC GATCGGCTGG CGGCCGCCGG CCGGGTGTTG GCCCCACTGG CCGGCCGGTG GGCCGGCGCC GCGCGCTGGC AGGCGCCGAT TGCCGTCGAG ACCGTCGCGA CCACCAACGG CGCCGGGGAC GCCTGCACCG CCGGGCTGCT CGCGGCGATC GCCCGCGGCG CCGACCCGCG GTCCGCCGCG CTGGTGGCCG TCGGGGCCGC GGCCGCCGCG GTCGCCGGCC GGCGACCGAC CCCGGACGAG GTGCTCGCCA GGGTACCGGC GGCCGGTGCG GTGCTGGGCG ACGAGGGGCC CGCCCGCCCG CCGGCCGGCC CGATCGTGCT GCCGGCCAAC CAGCCGCGCG ACCGGTTCTA CCGTGGCGGC TCGCGGATCG CCGCCTTCCG CGGCGACGCC GCCCCGCCGC CCAACACCCC GGAGGACTGG GTCGGCTCCA CCACCTGCGT CCGCGGCCAG GACCCCACCG GCCGGACCGT GCTGCCGGAC GGCGCCGACC TCGCCACGGC GATCGCCGCG GACCCCGAGT ACTGGCTCGG TGCAGCGCAT CTGGCTCGCT ACGGGGTGGA CACCAAGCTG CTGGTCAAGC TGCTGGACGC CGGGCAGCGG CTGCCCGTGC ACGCCCACCC GGACGGCGCG TTCGCCCGCG CCGAGCTGGG CGCCGCGCAC GGCAAGGCGG AGGCGTGGTC GATCCTCGCC GGCGGCGAGG TCCATCTCGG GTTGCGCCGG ACCGTCGAGC CGGCGGAGCT GCGTGCGCTG GTCGACGGGC AGGACACCGA GACGTTGATC GAGCTGCTGC ACCGGGTGCC GGTGGCGCCG GGGGACCGGG TCTACGTGCC GCCGGGGGTG CTGCATGCGA TCGGCGAGGG GGTGCTGCTG GCCGAGGTGC AGGAGCCCGA GGACCTGTCC ATCCTGCTGG AATGGCGGGA CTTCGACCTG GACGGAACCG TCGACGGTCA CCTGGGTCTG GGCTTCGACA AGGCACTGCA GGCGGTCGAG CGCACCGGCC GGACGCCGGC CGAGGTGGAC GCGTTGATCG TCCGGTCGGA CGACCGGGCC GCCGGCCTGC CCGCGGCCGC GGACGAGTAC TTCCGGCTGG AGCGGATCGA CGTGGCCGGC CGGGCCGTCC TGGGCGACGG GTTCGTCGTG CTGATCGTGG TGGACGGGCC GCTGGCCCTG GAAGGTCCGG CCGGTGGGGT GGCCCTGCCG GCCGGGGCGA CCGTCCTGCT GCCGGCCGGT TGCCCGTCCC GGCAGTTGCA CGGCCAGGGC CGGGCGCTGA TCGCGCGCCC ACCGGCGGCC TGA
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Protein sequence | MHTIAVAGHI CVDVTPELGP TAQLTPGRLI EVGPLALELG GCVANTARAL GALGVPVLAS ALTGDDELGR YAQRAVAELP GVTGRLTACP GRATSYSLVL EPPRTDRTFW HHTGVNCDFT GASVDLDGAD LLHVGYPSLL PGLLTDGGTP LVELLGRARA AGLTTSIDLA VVDPDSAAGR LDWAAILARV LPLVDIVSPS ADDLVSALRL TEPVTPALVE TLADRLIGWG AAVVAVSAGA GGVRLRAGSA DRLAAAGRVL APLAGRWAGA ARWQAPIAVE TVATTNGAGD ACTAGLLAAI ARGADPRSAA LVAVGAAAAA VAGRRPTPDE VLARVPAAGA VLGDEGPARP PAGPIVLPAN QPRDRFYRGG SRIAAFRGDA APPPNTPEDW VGSTTCVRGQ DPTGRTVLPD GADLATAIAA DPEYWLGAAH LARYGVDTKL LVKLLDAGQR LPVHAHPDGA FARAELGAAH GKAEAWSILA GGEVHLGLRR TVEPAELRAL VDGQDTETLI ELLHRVPVAP GDRVYVPPGV LHAIGEGVLL AEVQEPEDLS ILLEWRDFDL DGTVDGHLGL GFDKALQAVE RTGRTPAEVD ALIVRSDDRA AGLPAAADEY FRLERIDVAG RAVLGDGFVV LIVVDGPLAL EGPAGGVALP AGATVLLPAG CPSRQLHGQG RALIARPPAA
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