Gene Namu_3330 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNamu_3330 
Symbol 
ID8448945 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNakamurella multipartita DSM 44233 
KingdomBacteria 
Replicon accessionNC_013235 
Strand
Start bp3662885 
End bp3663448 
Gene Length564 bp 
Protein Length187 aa 
Translation table11 
GC content71% 
IMG OID645042408 
ProductDimethylmenaquinone methyltransferase 
Protein accessionYP_003202648 
Protein GI258653492 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0684] Demethylmenaquinone methyltransferase 
TIGRFAM ID[TIGR01935] RraA famliy 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value0.00629512 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.00927327 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
GTGGCGAACA TCGGCGATGC CCGCAGCCGG ATGGGCATGG TCGATTCCGG CATCCACGCC 
CTCTGGAAGG GCGCCCGGGC GGTCGGCCGA GCCCGCACCG TCTGGGTCCG GGAGGGGGAC
AATAAGGCCA TCCATGAGGT CATCGATCAC GTGCAGCCCG GCGACATCAT CGTCATCAAC
GGCCAGGGCG CGACCAATCG CGCCCTGATC GGGGAGCTGA TCACCGAGAA GCTGCGGGTG
CGCGGCGCGG TCGGCATGGT CATCGACGGC GCCGCCCGTG ACGTCGATGT CCTGGAGGAG
ATGGGCTTCG GCGTGTGGGC CCGCGCGGTC AGCCCGGCCG GTCCGTACAA GGACGGCCCG
GGGCGGATCA ACATTCCGGT CGCCGTCGGC GGGGTCGTGG TCAACCCCGG CGACATCGTC
GCCGCCGACA GTGACGGCGT CATCGTCATC CCGGCCGCCG AGGCGGTGAC CTCGTTGTTG
GCGGGCCGTG CGGTCGAGGC CGATGAGGCC CGACGCCGCG CCGCGATCCA GGCCACCGCG
AACCGGATCG AGGTGACCGC ATGA
 
Protein sequence
MANIGDARSR MGMVDSGIHA LWKGARAVGR ARTVWVREGD NKAIHEVIDH VQPGDIIVIN 
GQGATNRALI GELITEKLRV RGAVGMVIDG AARDVDVLEE MGFGVWARAV SPAGPYKDGP
GRINIPVAVG GVVVNPGDIV AADSDGVIVI PAAEAVTSLL AGRAVEADEA RRRAAIQATA
NRIEVTA