Gene Namu_2363 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNamu_2363 
Symbol 
ID8447974 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNakamurella multipartita DSM 44233 
KingdomBacteria 
Replicon accessionNC_013235 
Strand
Start bp2605635 
End bp2606438 
Gene Length804 bp 
Protein Length267 aa 
Translation table11 
GC content70% 
IMG OID645041483 
ProductABC-2 type transporter 
Protein accessionYP_003201727 
Protein GI258652571 
COG category[V] Defense mechanisms 
COG ID[COG0842] ABC-type multidrug transport system, permease component 
TIGRFAM ID[TIGR00025] ABC transporter efflux protein, DrrB family 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value0.0153945 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.00708379 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGACTACCC TGTCGCACCC AATCGGCGAC TCCGTGATCA TGTTCCGGCG CAGCCTGGTC 
CGGATGAAGC GCTATCCGAG CATGACGATC ATGCTGGTGG GCTTCCCGCT GCTGTTCCTG
CTGCTGTTCG TCTACGTGTT CGGCGGCACG CTGGGCGCCG GCCTGCCGGG CGGCGGCGGC
GCCGACAGCC GGGCCGATTA CCTGGCCTAC GTCACGCCGG CCATCGTGCT GATGGCCGCA
GCCTCGGCCG CCCAGGGCAC GGCCATCTCG GTGGCCATGG ACCGGACCGA GGGCATCGTC
GCCCGGTTCC GGACCATGCC CATCGCGCCC AGCAGCATCC TGGGCGGGCA CGTGCTGGGC
AGCCTGGTCC AGTCGATGCT GGGCATGGGC ATCATCATGG CCGTCTCGGT GCTGCTGGGC
TTCCGGCCGA CCGCCGACCC CGCCCAGTGG CTGGTGCTCA TCGCTCTGCT GGCCCTGATC
GCCTTCGCCC TGACCTGGCT CACGGTCGCC TTCGGCCTGC TCTCCCGCAG CGTCGAGACG
GCCAGCAACA CCCCTACCTT CCTGATGATC CTGCCGTTCC TGAGCAGCGG GTTCGTGCCG
ACCGCGTCGA TGCCGGCCGG GCTGTCCTGG TTCGCCGAGC ACCAGCCGTT CACCCCGATG
ATCGAAGGCA TTCGGGGGCT GCTGGCCGGC CAGTGGGAGT GGGCCACCCT GGCCACCGCC
GCGGGCTGGT GCGTGATCAT CGCCATCGCC GGATACCTCT GGGCGCGCAG CCTGTTCCGC
CGCCCCGCGA CGGCCGACCA CTGA
 
Protein sequence
MTTLSHPIGD SVIMFRRSLV RMKRYPSMTI MLVGFPLLFL LLFVYVFGGT LGAGLPGGGG 
ADSRADYLAY VTPAIVLMAA ASAAQGTAIS VAMDRTEGIV ARFRTMPIAP SSILGGHVLG
SLVQSMLGMG IIMAVSVLLG FRPTADPAQW LVLIALLALI AFALTWLTVA FGLLSRSVET
ASNTPTFLMI LPFLSSGFVP TASMPAGLSW FAEHQPFTPM IEGIRGLLAG QWEWATLATA
AGWCVIIAIA GYLWARSLFR RPATADH