Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Namu_1974 |
Symbol | |
ID | 8447583 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Nakamurella multipartita DSM 44233 |
Kingdom | Bacteria |
Replicon accession | NC_013235 |
Strand | + |
Start bp | 2182125 |
End bp | 2183147 |
Gene Length | 1023 bp |
Protein Length | 340 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 645041102 |
Product | 6-phosphogluconolactonase |
Protein accession | YP_003201348 |
Protein GI | 258652192 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG2706] 3-carboxymuconate cyclase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 0.290723 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 0.0128629 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCTGTC TCGCGTTCGT CGCGAATGCC ACCGATGGCA CGGTGACCAC ATTTTCGCTG GACGACGACG CCGTCCTTCG GCGGCTGGCG GTCAGCGAGA TCGGGCCGGG TTGTTCCTCC CTGGTCGTGA ACGCCGAGCG GCGGCAGCTC CATGCGTCGG TGAAGGGCGA TCCGCCGGCC ATCGTGACGT GCCGGATCGG CGACGACGGC CGCCTGGTGC CGGTCTCGCG GGGTCAGGTC GAATCGTCAG TGAGCTACCT CGCGCTGAGT CCCGACGGGG GCACGATGCT GGCGGCCTCC TATGGGGGCG GATTCGGCAT CTCGATGCCG GTCCACGACT CGGGTGTCGG TGAGGTGGTG TCCCGGATCG ACCTTCCCCA CATGCACTCG TGCGCGGTCG GGCCCGAGGG AAGGACCGCC TACTTCGTCT CCCTCGGAGC GGACCTGATC GCGCAGTGTG CCCTGGACGG TGCAACCCTG ACCCCGCTCG ATCCGCCGAC CGCGGCGGCC CCGACCGGAT CCGGGCCGCG GCACCTCGTC CTGACCCGCG ACGGGGCGCA TGTCTATGTG ATGACCGAGT TCTCGGGCGA CGTGCTGCAC TACTCGCGCT CGGACCAGGG CGTTCTCGCT CTGGTCGGGC AGGCGGCGGC GTTCGCTCCG GATCGCGGGC TCCGGCACAG CCGCTTGGGC GCGGACCCGA TCGCCGACCA CCTCATCTGG GGCGCCGATC TGCATCTGTC GCTCGACGAA CGCACGTGTT GGGCCAGCGA GCGGTCGGAG TCGACACTGG CCACGCTCAG GATCGACGCC GACGGTACCC CGCATCCGGC CGAGCGGTTC ACCCCCGCCG AGAAGCAGCC TCGGGGATTC GCGGTCTCAC CGGATGGCCG GTATCTGCTG TGCGCCGGCG AGAAGTCGAC CACCGTCTCG CTTTTCCGGA TCACTCCCGA CGGCGGCCTG GCCGCCAGTG GGCAGTTCGA GACCGGCCGC GGCGCCAACT GGGTGCGGTT CCTGTCCGCC TGA
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Protein sequence | MSCLAFVANA TDGTVTTFSL DDDAVLRRLA VSEIGPGCSS LVVNAERRQL HASVKGDPPA IVTCRIGDDG RLVPVSRGQV ESSVSYLALS PDGGTMLAAS YGGGFGISMP VHDSGVGEVV SRIDLPHMHS CAVGPEGRTA YFVSLGADLI AQCALDGATL TPLDPPTAAA PTGSGPRHLV LTRDGAHVYV MTEFSGDVLH YSRSDQGVLA LVGQAAAFAP DRGLRHSRLG ADPIADHLIW GADLHLSLDE RTCWASERSE STLATLRIDA DGTPHPAERF TPAEKQPRGF AVSPDGRYLL CAGEKSTTVS LFRITPDGGL AASGQFETGR GANWVRFLSA
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