| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Namu_0117 |
|---|
| Symbol | |
|---|
| ID | 8445697 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Nakamurella multipartita DSM 44233 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013235 |
|---|
| Strand | - |
|---|
| Start bp | 129982 |
|---|
| End bp | 131313 |
|---|
| Gene Length | 1332 bp |
|---|
| Protein Length | 443 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 71% |
|---|
| IMG OID | 645039265 |
|---|
| Product | diguanylate cyclase |
|---|
| Protein accession | YP_003199540 |
|---|
| Protein GI | 258650384 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG2199] FOG: GGDEF domain |
|---|
| TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 72 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 44 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGACGGCTC TGCAGGAGTT TGCTGCGGCT CCGTGGCGTG CCCGGGTCTG GGTTCTGCTC
TCCGCCGTAC TGGCCGTCGG GCTGGCCCTG GCCCTGTCCA TCTGGCCGGA CCCGGTCTGG
CAGCTCACCG ACATCGTCAC CGCGCTGGCC CTGGTCATCG GCAGCGTGAT CAACGTCGAA
CTGGGCCGGC TGTTCGAGGG TGGCCGGGTC GCCCAGCAGC GGCCGCACAA GGCGCTGTCC
GCCTGGCCGA TGGCCGCCAC GGTGCTGCTC CCGACCTTCT ACCTGCTGCC GGTGGTGGCG
TTGATCTACG CGCATGCCCG CTGGCGCGGT ATGCGGGTCA CGTTGTGGAA GTGGTGCGCA
TCGGCGTGCT TCCTGGTGTG CGCGGGCGCC ATCGCCACCA TCATCGTGAC GCCCCCCGGC
GGGGACGGCA CCCCGCCGAC CCTGACCTCG GGGTTGCCCG GGGTGCTGAT CATGGTCGCC
GCGATCCTGA CCTTCCTCGC CGTTGAATCG GCCATGCTGG GCATGTCCGG CTGGCTGAAC
ACGGCGCAGG ACGAGGTCTG GCTCCGGCGC ACCCTGGCCG ATCCGGCCTT CTACCTGACC
GAGGCCGGGG TGCTGACCAT CGGTGCGCTC ACCGGGCTGC TCGGCGCCAA CGCCCCGTGG
TTCGTGCTGC TGCTGATCCC GGTCTACGGC TTCCTGCAGC AGTCCGTGCT GCACCGCCCG
CTGCAGGAGC GGGCCACCCG TGATCCCAAG ACCGGCCTGC TGGTGTTCAA CGCCTGGCAG
CGGCTGGCCG TCGAGGAGAT CCGGCGGATG AGCGCCGCCC GCCGCTCCTG GGCGGTGATC
TTCGCCGACA TCGACAACTT CCGGTTCTAC AACCAGCGGC ACGGTCACCT GGGCGGCGAT
CACGCCCTCG AGCACGTCGC CCAGATCATC ACCTCGAACG TGCGACCCAA GGACCTGACC
GCCCGGTTCG GCGGCGAGGA GTTCTGCATC CTGCTGCCGG ACACGGTGGC CGCCGAGGCC
GAGCTGGTGG CCCAACGGCT GCTCACCTCG GTGAGCGCGG CATCGGCGAG CCTGCCCGAA
CCGGTCACCG TCAGCATCGG CGTGGCCGTG GTCGAGGCGG GCAATACCCC GATGGAGCTG
GCCGTCGTGC TGGCCCGCGC GGACCAGGCG CTCTACCGGG CCAAGCTGGA GGGTCGCAAC
ACCGTCCGGA TCGCCGCCCC GGCCGCCGAC ATCGACAGCG GGGTGCGCAC GACCTGGGAC
GCCAAGCTGA ACCGGTCGGC CCACCGCGCG CAGTACTCGG AGGACGGCGA ACGCCAGCGC
CGGTGGGGCT GA
|
|---|
| Protein sequence | MTALQEFAAA PWRARVWVLL SAVLAVGLAL ALSIWPDPVW QLTDIVTALA LVIGSVINVE
LGRLFEGGRV AQQRPHKALS AWPMAATVLL PTFYLLPVVA LIYAHARWRG MRVTLWKWCA
SACFLVCAGA IATIIVTPPG GDGTPPTLTS GLPGVLIMVA AILTFLAVES AMLGMSGWLN
TAQDEVWLRR TLADPAFYLT EAGVLTIGAL TGLLGANAPW FVLLLIPVYG FLQQSVLHRP
LQERATRDPK TGLLVFNAWQ RLAVEEIRRM SAARRSWAVI FADIDNFRFY NQRHGHLGGD
HALEHVAQII TSNVRPKDLT ARFGGEEFCI LLPDTVAAEA ELVAQRLLTS VSAASASLPE
PVTVSIGVAV VEAGNTPMEL AVVLARADQA LYRAKLEGRN TVRIAAPAAD IDSGVRTTWD
AKLNRSAHRA QYSEDGERQR RWG
|
|---|
| |