| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | NSE_0553 |
|---|
| Symbol | dnaB |
|---|
| ID | 3931610 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Neorickettsia sennetsu str. Miyayama |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007798 |
|---|
| Strand | + |
|---|
| Start bp | 481270 |
|---|
| End bp | 482754 |
|---|
| Gene Length | 1485 bp |
|---|
| Protein Length | 494 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 40% |
|---|
| IMG OID | 637900709 |
|---|
| Product | replicative DNA helicase |
|---|
| Protein accession | YP_506435 |
|---|
| Protein GI | 88608872 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG0305] Replicative DNA helicase |
|---|
| TIGRFAM ID | [TIGR00665] replicative DNA helicase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 0.78949 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGCTTGGTT TGGGACCAAG AGGTCGGGGG TTCGAATCCC TCCACTCCGA CACTTTTCTG
CATTATCAAA AAGCGTTGAA TAATTTTTCC GCCGAACTTC CTAACAATAT TGAAGCAGAA
CAACTTATAC TCGGTGCTCT ACTCACTAAT AATGATGCCT GTGATGAGAT AGAAGAGATT
ATTTCATCAT CTTCTTTTTA TGCTCCGGTA CATAGAAAAA TCTTTGAAGT TTTACTTCAC
CTTAGATCAA AAGAACTTGT TGCTAATCCC GTAACCCTGA AGAATTATCT TGAATCAAGC
AATGAATTAA GCGCTATTGG TGGTCAAGAA TATCTACTCA ATATAATTGA AAAAGCTAGT
ATTGTAGTGG ACGTATCAAG TTTAGCACGT GTAATACAAG AGCTTTACAT AAGAAGGCAA
CTAATCGTTT TGGCGCAAAA AATGATTTCT GGGGCCACCG GCGAACATAG CAATATAACT
ACAAGCGAGC AGATAGAAGA AGCCGAACAT TTTTTATTTC AACTTGCGAG CTCAGGTGAA
CTTGATTCAT CCTGCTTACA CATTTCTAAA CCGATTGAGG TCGCGGTTGA ACGAGCAAAA
ATTACTTTCA AAGCAAAGGC ACCGTTTCAG AATACTTCCA CTGGCTTCAG AGATATAGAT
AATCTTTTGG GCGGGCTGCA AAATTCAGAC CTCTTAATAA TCGCAGGACG TCCATCTATG
GGTAAAACAT CTTTAGCCAT AAGTATGGCC CTAAGGGTAA CTAGAGAGCT ACAAAAGCAA
GGAATGTCTG CGTGCTTTTT CTCCTTAGAA ATGTCAGCTG ATCAAATTGC TTCTAGAATG
CTGTCTGTGC ATTCTGGAGT CGACGCATTC AGCATTAGAA CAGGTAAAAA GTTTTCTGAA
GAATCACTAA AGAAAGTGAT TGAAAGTAGC AAAGCATTGT CCGAACTACC CCTTTTTATA
GATGATACTG CTTCTGTATC AATCTCAGCG CTACGCACAA AACTACGCAG ATTGCATAGA
AAGGCAAAAC TCGGGGCCAT TTTCATAGAT TACCTACAAC TTTTACGAGG CTCTAAGGGT
ACAGAGTTCA ACAGAGTACA AGAAGTCTCT GAAATCACTA AGGGACTAAA GTTAATCGCT
AAGGAACTTA ATGTACCAGT TATTGCTCTC TCGCAGCTCT CCCGACTGGT TGAACAGAGA
GAAGACAAGC GTCCGCAACT TTCTGATTTA AGAGAGTCGG GCTCAATAGA ACAAGATGCA
GACGTTGTAA TGTTTGTTTT TCGCGAAGCC TACTACATGA TGCGTAAACA ACCTTTAAGT
GATGATGAAA ATTATGAGAA TTGGCAATTC AAGATGGACG AAGTAAGAAA CAAAGCCGAG
ATAATAATAG CAAAACAAAG GAACGGCCCA GTTGGGACCG CCCTACTTTT TTTCGATCAG
TCAACTACAG TCTTTGATGA TCTGTCCCTA TTCTCAGATG ATTAA
|
|---|
| Protein sequence | MLGLGPRGRG FESLHSDTFL HYQKALNNFS AELPNNIEAE QLILGALLTN NDACDEIEEI
ISSSSFYAPV HRKIFEVLLH LRSKELVANP VTLKNYLESS NELSAIGGQE YLLNIIEKAS
IVVDVSSLAR VIQELYIRRQ LIVLAQKMIS GATGEHSNIT TSEQIEEAEH FLFQLASSGE
LDSSCLHISK PIEVAVERAK ITFKAKAPFQ NTSTGFRDID NLLGGLQNSD LLIIAGRPSM
GKTSLAISMA LRVTRELQKQ GMSACFFSLE MSADQIASRM LSVHSGVDAF SIRTGKKFSE
ESLKKVIESS KALSELPLFI DDTASVSISA LRTKLRRLHR KAKLGAIFID YLQLLRGSKG
TEFNRVQEVS EITKGLKLIA KELNVPVIAL SQLSRLVEQR EDKRPQLSDL RESGSIEQDA
DVVMFVFREA YYMMRKQPLS DDENYENWQF KMDEVRNKAE IIIAKQRNGP VGTALLFFDQ
STTVFDDLSL FSDD
|
|---|
| |