Gene NSE_0473 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNSE_0473 
SymbolcycM 
ID3931740 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNeorickettsia sennetsu str. Miyayama 
KingdomBacteria 
Replicon accessionNC_007798 
Strand
Start bp390975 
End bp391514 
Gene Length540 bp 
Protein Length179 aa 
Translation table11 
GC content41% 
IMG OID637900629 
Productcytochrome c 
Protein accessionYP_506358 
Protein GI88608561 
COG category[C] Energy production and conversion 
COG ID[COG3474] Cytochrome c2 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value0.591637 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAGATC TGGAATTTAA TAAGCTTTTT GCATCTGTGC TTCTCTTTGG AATAACGGTT 
CTGTCGGTAA GCAACGTAGT GGATGCCCTC TACCATCCCA GAGAGGTTAC ACATTACCAA
TATGCAGTTA CGAGTGCTGA GACTATAGAG TCACAAACAA ACAAATTTGA TCCGGCAGCC
GTTGATATGA CTACCTTCTT CAAAGATGCA AACATAGAAG AGGGTAAAAA ATTAGCTAAA
AAGTGCGTTG CCTGTCACAC CTTTGAGAAG GGTGGACATA ACAAAGTTGG TCCTAATCTT
TGGGATATTT TGGGAAAAAA TAAAGCCCAC TTGGGGGATG CATTTAAATA TTCCAAAGCT
TTACTGGAAA AAGGTGGTAC CTGGGATTAT AACTCAATGA TACATCTACT ATACAAACCA
GCCCAGTACA TCAAGGGAAC TAAGATGTCA TTTGCGGGAC TTTCCAATCC TCAGGATATA
GCAAATCTAA TCGCATACCT ACGTAGTCTC TCTGATTCAC CTGTTCCGCT GCCAGAATAA
 
Protein sequence
MKDLEFNKLF ASVLLFGITV LSVSNVVDAL YHPREVTHYQ YAVTSAETIE SQTNKFDPAA 
VDMTTFFKDA NIEEGKKLAK KCVACHTFEK GGHNKVGPNL WDILGKNKAH LGDAFKYSKA
LLEKGGTWDY NSMIHLLYKP AQYIKGTKMS FAGLSNPQDI ANLIAYLRSL SDSPVPLPE