| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | NATL1_17061 |
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| Symbol | ffh |
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| ID | 4781121 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Prochlorococcus marinus str. NATL1A |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008819 |
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| Strand | - |
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| Start bp | 1389431 |
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| End bp | 1390894 |
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| Gene Length | 1464 bp |
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| Protein Length | 487 aa |
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| Translation table | 11 |
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| GC content | 41% |
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| IMG OID | 640084990 |
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| Product | signal recognition particle protein (SRP54) |
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| Protein accession | YP_001015526 |
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| Protein GI | 124026411 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG0541] Signal recognition particle GTPase |
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| TIGRFAM ID | [TIGR00959] signal recognition particle protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.254575 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGTTTGATG CACTAACTAA TCAATTTGAA GATGCTGTAA AGGCATTTAA AGGTGAAGCT
AAAATTTCAG AGGAGAATGT TGATGAAGCA CTTAAGCAGG TCAGACGAGC TTTATTAGAT
GCAGATGTCA GTTTGTCTGT AGTAAAAGAA TTTATTGATG AAGTAAGAGT AAAGGCAGTT
GGAACAGAAG TTGTAAGAGG TATAGACCCT GGACAGAAAT TCATTCAAGT AGTTCATGAA
GAACTTGTGA ATGTTATGGG AGGAGAGAAT GACCCCTTAG CAAATTCAGA GGAACAGCCA
ACAGTCATTT TGATGGCTGG ACTTCAGGGA GCTGGAAAGA CAACCGCTAC AGCAAAACTT
GGATTGCTTC TTAAAGAAAA AAATAAAAAG CCATTACTTG TGGCTGCCGA TACTTACAGA
CCAGCAGCTA TTGATCAATT AGTAACTTTG GGAAAACAAA TTGATGTAGA GGTTTTTAAT
TTAAGTTCTA ATTTAAAGCC GGAGGAGATT GCTAAAAAAG GCTTGGAAAA AGCTAAAAAA
GAAGGTTTTG ACACTGTTCT TGTAGATACT GCTGGGCGGC TCCAAATTGA TACCGACATG
ATGGGAGAGA TGGTTCGAAT TAAAGAGGCC GTTCAACCAG ATGAAGTTTT ATTGGTAGTT
GATTCAATGA TTGGCCAAGA GGCCGCAGAC ATCACCAGAA GTTTTCATGA AAAAGTAGGA
ATAACAGGCG CTGTGCTCAC GAAGCTAGAT GGAGATTCGA GAGGTGGAGC TGCTCTTTCT
ATTAGAAAAA TCAGTGGAAA ACCAATCAAA TTTATAGGTA CTGGAGAAAA GGTTGAGGCA
TTGCAACCTT TTTATCCCGA GAGGATGGCT AGCAGAATTT TAGGGATGGG CGATGTTTTA
ACTCTTGTCG AAAAAGCACA GAAAGAAGTT GAAATTGCTG ATGCAGAAAT CATGCAAAAG
AAGCTTCAAG AAGCAACTTT TGATTTTTCA GATTTCGTAA AACAGATGAG GATGATAAAG
CGAATGGGCT CGTTAGGGGG GCTGCTGAAA ATGATTCCTG GGATGAATAA AATTGATGAT
GGAATGATTA AAAGTGGAGA AGATCAACTT AAAAAAATCG AGGCAATGAT TGGTTCAATG
TCAGTAGAGG AGAGGAATAA ACCTGAATTG TTGGCAGCGC AACCATCAAG ACGTCGAAGG
GTTGCAAGTG GCAGTGGACA TAAGCCAGCA GACGTTGATA AGGTTCTCGC GGATTTTCAA
AGGATGCGAG GCTTGATGAA GCAGATGTCT ACAGGAGGAG GTCTTCCCGG TATGGATGGA
GGTCTCCCTG GTATGGGTGG ACTACCTAGT ATGCCTTCAT CTGGTGCTAA TCCATATCAG
TCAAGGAAAG GAAAAGGAGG TCCAGGTTTG CCCCCCCGAA GACAGCGACC AATTAAGAAA
AAGAAAGGTT TTGGTGATCT TTAG
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| Protein sequence | MFDALTNQFE DAVKAFKGEA KISEENVDEA LKQVRRALLD ADVSLSVVKE FIDEVRVKAV
GTEVVRGIDP GQKFIQVVHE ELVNVMGGEN DPLANSEEQP TVILMAGLQG AGKTTATAKL
GLLLKEKNKK PLLVAADTYR PAAIDQLVTL GKQIDVEVFN LSSNLKPEEI AKKGLEKAKK
EGFDTVLVDT AGRLQIDTDM MGEMVRIKEA VQPDEVLLVV DSMIGQEAAD ITRSFHEKVG
ITGAVLTKLD GDSRGGAALS IRKISGKPIK FIGTGEKVEA LQPFYPERMA SRILGMGDVL
TLVEKAQKEV EIADAEIMQK KLQEATFDFS DFVKQMRMIK RMGSLGGLLK MIPGMNKIDD
GMIKSGEDQL KKIEAMIGSM SVEERNKPEL LAAQPSRRRR VASGSGHKPA DVDKVLADFQ
RMRGLMKQMS TGGGLPGMDG GLPGMGGLPS MPSSGANPYQ SRKGKGGPGL PPRRQRPIKK
KKGFGDL
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