Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | NATL1_08571 |
Symbol | rfbB |
ID | 4780414 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Prochlorococcus marinus str. NATL1A |
Kingdom | Bacteria |
Replicon accession | NC_008819 |
Strand | + |
Start bp | 786366 |
End bp | 787442 |
Gene Length | 1077 bp |
Protein Length | 358 aa |
Translation table | 11 |
GC content | 35% |
IMG OID | 640084132 |
Product | dTDP-D-glucose 4,6-dehydratase |
Protein accession | YP_001014680 |
Protein GI | 124025564 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG1088] dTDP-D-glucose 4,6-dehydratase |
TIGRFAM ID | [TIGR01181] dTDP-glucose 4,6-dehydratase |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 5 |
Fosmid unclonability p-value | 0.000591053 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGGAAAAAA ATTATTTTTT AAATGAACTT CTAGGAAATC GGAGAAGGAT TCTAGTTACT GGAGGAGCAG GCTTTATTGG TGGAGCAGTT ATAAGAAAGT TGCTTAAAGA GAGCACTTCT AAAATTTTCA ATATCGACAA AATTGGATAT GCAAGTGACC TGACAGCTAT AGACGAAATT TTAAGAACTA AAGATTATTC AGATCGTTAT GATTTCGCAA AAATTGATCT TTCTATTCCA GATGAAACAG CCAAAGCGAT AAGTGATTCA GATCCAGACT TGATAATGCA TTTGGCGGCA GAAAGCCATG TAGACAGATC AATTCAAGGA CCTGAGGCTT TCATAAATAG CAACATTTTT GGGACATTTA ATCTTCTTGA AGCAACAAGA AAACACTATG AAAATCTTTC GAATAAACGA AAAAATGACT TTCGTTTTCT ACACATAAGC ACTGATGAAG TATTTGGTTC CTTAGGTTTA AATGGAAAAT TTACAGAATC AACTTCCTAT GACCCGAGAA GCCCATACTC CGCCAGCAAA GCATCAAGTG ATCATTTAGT TAGGTCATGG CACCACACCT TTCAACTTCC CATAGTCATA ACAAATTGCA GTAATAACTT TGGACCATGG CAATTCCCTG AAAAATTAAT ACCAGTAGCT ATTAACAAAG CATTGGCTCT TAAATCCATA CCACTTTATG GTGATGGAGA AAATATTAGA GATTGGCTTT ACGTCGATGA TCACGTAGAC GCTCTATTTC TTGCCGCTAA TAAAGGTAAA ATTGGAGATT CGTATTGTGT AGGAGGGTAT GGAGAGAGAA AAAATATAGA AATTTTAAAA ATAATATGCA AAATTTTAGA TGAAATATAT CCTAAACATT CACCCTTCGA ACGACTTATT ACAAAAGTAC AGGACAGGAA AGGTCACGAT CGAAGGTATG CAATCGATCC AAGCAAAATC AGAAACGAAT TGGGTTGGGA ACCAAAGTAC TCATTAGAAG ATAGACTTGA AACGACAGTT CAATGGTACA TAAAGAATAA AAACTGGTCG CAAAGATTGA TTCAAAGCTC GCCATAA
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Protein sequence | MEKNYFLNEL LGNRRRILVT GGAGFIGGAV IRKLLKESTS KIFNIDKIGY ASDLTAIDEI LRTKDYSDRY DFAKIDLSIP DETAKAISDS DPDLIMHLAA ESHVDRSIQG PEAFINSNIF GTFNLLEATR KHYENLSNKR KNDFRFLHIS TDEVFGSLGL NGKFTESTSY DPRSPYSASK ASSDHLVRSW HHTFQLPIVI TNCSNNFGPW QFPEKLIPVA INKALALKSI PLYGDGENIR DWLYVDDHVD ALFLAANKGK IGDSYCVGGY GERKNIEILK IICKILDEIY PKHSPFERLI TKVQDRKGHD RRYAIDPSKI RNELGWEPKY SLEDRLETTV QWYIKNKNWS QRLIQSSP
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