| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mvan_5828 |
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| Symbol | |
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| ID | 4643410 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Mycobacterium vanbaalenii PYR-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008726 |
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| Strand | + |
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| Start bp | 6215308 |
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| End bp | 6216246 |
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| Gene Length | 939 bp |
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| Protein Length | 312 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 639809304 |
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| Product | AraC family transcriptional regulator |
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| Protein accession | YP_956599 |
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| Protein GI | 120406770 |
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| COG category | [K] Transcription |
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| COG ID | [COG4977] Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 0.488143 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCATCC CCACCGACGG CCGGTCACGG CACATCGCGA TGGTGGTGTT CGACGGTGTC
CGGACGCTCG ACCTGACCGG ACCTCTGGAG GTTTTCGACG TGGCGCAGGC ACTCGGCTGC
CGCTACTCGA TCGGCCTGTA CTCGAGTTCG GGCGCCACGT CCGTGCGGTG TTCCTCGGGG
CTGTCCATCG ATGCGGCACC GGCCTCGGTG GCAGCCTCGG AGGTGGACAC CCTGCTGGTG
CCGGGCGGCG AATGTCTGGT CGCCGGCGGG GTTCCCGCGC ATCTGCGCCG CGCGATCCGC
GCGCTGGCCC CGGGCGCGCG CCGGATCGCC TCGATCTGCG CAGGTTCGTT CGCACTGGCC
GCGGCCGGTG TGCTCGACGG ACGGCGCGCC ACCACCCACT GGCGGCACCT GGACACGTTC
GCCCGCCGGT ATCCGTCGAC ACGCGTCGAA CGCGAGTCGG TCTACACCCG TGACGGTGAG
ACCTGGACAT CGTCCGGCGG TACAGCGGGC ATCGACCTCG CCCTGGCACT GGTCGGTGAC
GACTTCGGAG CCGCTGTGGC GCAGGAGATC TCGAAGGAAA TGGTGGTGCT CGGCAGACGA
ATGGAAGGCC ACCCGCAGAT CTCAGCCGCG GCACGCACAC CGCGCCCGAA GCATCCCGAA
CTCGAACGGC TGATGGCCAC GGTCGTCGTC AACCCGGCCG GACACTACGA ACTCGAGACG
GTCGCCGCGC AGCTCGGGCT CAGCCCGCGC CACCTTGCCC GGCTGTTCAA GGCCCAGGTC
GGTGTGACGT TGCGGGAATA CGTCAACGAG GTCCGCCTGG AGAACGCTGT CGCTCTGGTG
CTTGCGGGCG AGTCCTTCCA CGCCGCGGCA CAGCGCAGCG GCTTACGGTC CGGCGCGCGG
GTCCGCGACC ACCTCATCGC GCGGCGGACA CCCGCGTAG
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| Protein sequence | MSIPTDGRSR HIAMVVFDGV RTLDLTGPLE VFDVAQALGC RYSIGLYSSS GATSVRCSSG
LSIDAAPASV AASEVDTLLV PGGECLVAGG VPAHLRRAIR ALAPGARRIA SICAGSFALA
AAGVLDGRRA TTHWRHLDTF ARRYPSTRVE RESVYTRDGE TWTSSGGTAG IDLALALVGD
DFGAAVAQEI SKEMVVLGRR MEGHPQISAA ARTPRPKHPE LERLMATVVV NPAGHYELET
VAAQLGLSPR HLARLFKAQV GVTLREYVNE VRLENAVALV LAGESFHAAA QRSGLRSGAR
VRDHLIARRT PA
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