Gene Mvan_4256 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMvan_4256 
Symbol 
ID4648964 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMycobacterium vanbaalenii PYR-1 
KingdomBacteria 
Replicon accessionNC_008726 
Strand
Start bp4565135 
End bp4566574 
Gene Length1440 bp 
Protein Length479 aa 
Translation table11 
GC content69% 
IMG OID639807723 
ProductAMP-dependent synthetase and ligase 
Protein accessionYP_955039 
Protein GI120405210 
COG category[I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG0318] Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.1551 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAGTGATC CTTGGGCGCT CGCCTTCGAG GATCGGCAGT ACAGTCTCGC CGACCTTGAC 
GCGCTGGCCG GCGGTATGGC GGCCGAGTTG CATCGGCGCG GCGTCGCGGC GGGATCGCGG
GTCGCGGTGA TGTCGTCCAA CCGTCCCGAG TTCGTGGTCG CACTCCGCGC GATCTGGCGG
CTGGGCGCGT CCGCGGTGCT GCTGAGCCCG GCCTGGAAGC AGGCCGAGGT CGGCCATGCG
CTGTCCCTGA CCGAACCGAC GCACGCCGTC GGTGATCATC CCGTGCTGGC CGGGTCGATG
CCGATGCTGT CGCTCGACGA GGAGATCGCG CCGGTAGCGC ACGGCGCGGT GCAACCCGCC
CCCACCCCTG ACGCCGATGC GGTGTTCGTG TTCAGCTCTG GAACCACCGG CATGCCCAAG
GCGGTCCGCC ACACGCATGC CTCACTGGCC GTCGCGGTGC GCCACTGGCG CGCTGCGCTC
GGGCTGACCT CCGCGGACCG GATGCAGGTG ATGACGCCAC CGTCGCACAT CCTGGGGCTG
CTCAACATCG TGATGGCGCT CGACACCGGC GCGTGGATCA GACTGCACCG ACGTTTCGAC
ATCGACGCGA TGCTGCGCCA TATCGAATCC GATCGCATCA CCATCGAGAT GGCGGTCGCG
CCGATCGCGC TCGCACTGTC CGCGCATCCG GGCCTCGAGG AACACGACCT GTCGTCGCTG
CGCTACATCA TGTGGTGTGC CACGCCGGTG ACTCAGACTG TCGCCGAGGC GGTTTCGGCG
CGTACCGGCG CCACATGGGT GACGGCCTAC GGCGCCAGCG AGCTTCCGGT GATCTCCTGC
AACGATCTGC AGGACGCGCG TCTTGACACC GTCGGGCGCG CCGTCGCGGG GGTCGACATC
CGCATCGTCT CGCTGGAGTC GGGGGCCCCG CTCGGACCCG GTGACGAGGG CGAGATCCAG
GTGCGGTCCG ATTCGGCGAT GGCCGGCTAT CTGCCGGATC ATTGGACGGC CGACGCCTTC
TGCGACGGCT GGTACCGAAC CGGCGACGTG GGCAGCCTCG ACGCCGACGG CTGGCTGCGG
ATCACCGACC GCGCCAAAGA GATGATCAAG GTGCGTGGCT TTCAGGTCGC GCCGGCCGAG
GTCGAGGCGG TGCTGCACGG TCACCCCGCC GTCGAGGACT GTGCGGTGTT CGGCGTCCCC
GCCGCCGACG GCGAGGCGAT CGTCGCTGCC GTCGCGGCGA GCGGTCCTTT GGACACCGAC
GACCTCGTCG CGCTGGTCGC CGAAAGGCTG GCCGGCTACA AGCGACTGAG TCAGGTCTTT
GTCGTGGACG AAATCCCGCG CCTGCCATCG GGCAAGGTGC TGCGGCGAGT GTTACGGGAG
CGGGCGATGA GCGCTCGCGC GGAGAGCGGA GGATTCGGTG GACGTCCGTC TGACCAGTGA
 
Protein sequence
MSDPWALAFE DRQYSLADLD ALAGGMAAEL HRRGVAAGSR VAVMSSNRPE FVVALRAIWR 
LGASAVLLSP AWKQAEVGHA LSLTEPTHAV GDHPVLAGSM PMLSLDEEIA PVAHGAVQPA
PTPDADAVFV FSSGTTGMPK AVRHTHASLA VAVRHWRAAL GLTSADRMQV MTPPSHILGL
LNIVMALDTG AWIRLHRRFD IDAMLRHIES DRITIEMAVA PIALALSAHP GLEEHDLSSL
RYIMWCATPV TQTVAEAVSA RTGATWVTAY GASELPVISC NDLQDARLDT VGRAVAGVDI
RIVSLESGAP LGPGDEGEIQ VRSDSAMAGY LPDHWTADAF CDGWYRTGDV GSLDADGWLR
ITDRAKEMIK VRGFQVAPAE VEAVLHGHPA VEDCAVFGVP AADGEAIVAA VAASGPLDTD
DLVALVAERL AGYKRLSQVF VVDEIPRLPS GKVLRRVLRE RAMSARAESG GFGGRPSDQ