Gene Mvan_3780 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMvan_3780 
Symbol 
ID4645143 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMycobacterium vanbaalenii PYR-1 
KingdomBacteria 
Replicon accessionNC_008726 
Strand
Start bp4023142 
End bp4023678 
Gene Length537 bp 
Protein Length178 aa 
Translation table11 
GC content68% 
IMG OID639807245 
ProductTetR family transcriptional regulator 
Protein accessionYP_954568 
Protein GI120404739 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value0.73638 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCGAGACG ACTGGCTCGT CGGGGATCGG CGTGCCGAAG CGGCCGACCG CATCTTTTCG 
GCGGCGACGG ACCTCATCGT GCGCGACGGT CTGGACGGCT TCGACATGGC CGCGTTGCAG
GCCGCAGTGC ACTGCTCGCG GGCCACCATC TACCGGCATG TCGGGGGTAA GGCCCAGATC
CGCGAGGCCG TCCTGTTGCG CCAGGCGGAG AGGATCATCG CGACGGTTCG CTCCGCCGTG
GTCGGGTTGA GCGGCGCCGA GCGCACCGTG ACCGCGGTTG TGGTTGCGCT GGAACGGATC
CGGGCCGACC CGATAGGACA GACGCTGCTC AGCGCAATGC GCAAGGATGA GTTGACGTGG
ATCGGCCGGT CCGCGGTCCC GCCTGCGCTG GCAGCCGAGT TGACCGGTAT CGACGACGAC
GATCCGCAGG CCGCGCAGTG GATCGTGCGT GTGGTGCTGG CGCTGTTGTT CTGGCCGGTG
GAGGATCCGG CAGCCGAACG AGAGATGCTG CAGCGATTCT TGATTCAGCG ACCTTGA
 
Protein sequence
MRDDWLVGDR RAEAADRIFS AATDLIVRDG LDGFDMAALQ AAVHCSRATI YRHVGGKAQI 
REAVLLRQAE RIIATVRSAV VGLSGAERTV TAVVVALERI RADPIGQTLL SAMRKDELTW
IGRSAVPPAL AAELTGIDDD DPQAAQWIVR VVLALLFWPV EDPAAEREML QRFLIQRP