Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mvan_3395 |
Symbol | |
ID | 4645005 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Mycobacterium vanbaalenii PYR-1 |
Kingdom | Bacteria |
Replicon accession | NC_008726 |
Strand | + |
Start bp | 3610820 |
End bp | 3611626 |
Gene Length | 807 bp |
Protein Length | 268 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 639806873 |
Product | short-chain dehydrogenase/reductase SDR |
Protein accession | YP_954198 |
Protein GI | 120404369 |
COG category | [I] Lipid transport and metabolism [Q] Secondary metabolites biosynthesis, transport and catabolism [R] General function prediction only |
COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 0.742124 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 22 |
Fosmid unclonability p-value | 0.43311 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCGCCG GGCGCGTCGC GGGCAAGCGG GTACTGATCA CCGGCGCCGC CCGCGGGATG GGCCGCAGTC ACGCCGTCCG CTTGGCCGGG GAAGGCGCCG ACCTGATCCT CGTCGACATC TGCGAGTCGT TGCCCGAGAT CGAGTACCCG CTCGCCTCCC CCGACGATCT GGCCGAAACC GCAAGGCTGG TCGAAGATAT CGGCAGGCGA GCGGTGACGC ACGTCGTCGA CGTGCGCGAC GGCGCCGCGC TGGCGACCGC CGTCGACGAC GGTGTCGCCC GGCTGGGCGG CCTGGACGCC GCGGTGGCCA ACGCCGGAGT GCTGACCGCG GGAACCTGGG ACACCACCAC CGCCGAACAG TGGCGAACGG TCGTCGACGT CAACCTGATC GGGACCTGGA ACACCTGCGC CGCGGCGCTG CCGCACCTGG TCGACCGCGG CGGCAGCCTG GTCAACATCA GCTCGGCGGC CGGGATCAAG GGCACGCCGC TGCACACGCC CTACACGGCG TCCAAACACG GCGTGGTCGG CATGAGCAAG GCGCTGGCCA ATGAGGTTGC CGCCCAGAGC GTGCGGGTCA ACACCGTGCA TCCGACCGGG GTGGAAACCG GGATGCGCCC GGAATCGCTG CGCGATCTGA TCGCACAACA GCGGCCCGAC CTCGGACCGC TGTTCCTCAA CGCGATGCCG ATCCAGATGG CCGAGGCCGT CGACGTCAGC AACGCGGTGC TGTTCCTGGT CTCCGACGAG TCCCGCTACG TGACGGGTCT GGAGTTCAAG GTCGACGCCG GCGTCACCCT GCGGTGA
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Protein sequence | MSAGRVAGKR VLITGAARGM GRSHAVRLAG EGADLILVDI CESLPEIEYP LASPDDLAET ARLVEDIGRR AVTHVVDVRD GAALATAVDD GVARLGGLDA AVANAGVLTA GTWDTTTAEQ WRTVVDVNLI GTWNTCAAAL PHLVDRGGSL VNISSAAGIK GTPLHTPYTA SKHGVVGMSK ALANEVAAQS VRVNTVHPTG VETGMRPESL RDLIAQQRPD LGPLFLNAMP IQMAEAVDVS NAVLFLVSDE SRYVTGLEFK VDAGVTLR
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